Gene detail information of Glyur000369s00020537 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61920.1 | 3.00E-27 | |
| NR | XP_006598879.1 | 1.47E-83 | PREDICTED: uncharacterized protein LOC100778399 [Glycine max] |
| trEMBL | tr|I1MKD1|I1MKD1_SOYBN | 5.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G02140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00369 | 13418 | 14032 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000369s00020537.1 | PF14009.1 | DUF4228 | 1 | 200 | 1.40E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.089 |
| SRR1783600 | control | 5.025 |
| SRR1783602 | moderate drought stress | 7.268 |
| SRR1811619 | moderate drought stress | 7.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.667 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.997 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.726 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.543 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.807 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.268 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.083 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.262 |
| SRR2868004 | Drought Stress (root) | 7.872 |
| SRR2967015 | Control (root) | 9.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.591 |
| SRR9715740 | Leaf | 0.675 |
| SRR9715741 | Leaf | 0.816 |
| SRR9715739 | Root | 6.747 |
| SRR9715742 | Root | 9.457 |
| SRR9715743 | Root | 11.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.239 |
| SRR8749028 | MeJA induced 9h | 0.534 |
| SRR8749029 | MeJA induced 9h | 0.282 |
| SRR8749030 | Uninduced | 0.124 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.263 |
| SRR8400027 | Control - Root | 11.274 |