Gene detail information of Glyur000368s00021713 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27390.1 | 3.00E-60 | translocase outer membrane 20-2 |
| NR | XP_003551330.1 | 2.20E-123 | PREDICTED: mitochondrial import receptor subunit TOM20-like isoform X1 [Glycine max] |
| Swissprot | tr|P92792|TOM20_SOLTU | 2.00E-84 | Mitochondrial import receptor subunit TOM20 |
| trEMBL | tr|K7MP90|K7MP90_SOYBN | 8.00E-124 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G01030.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00368 | 109968 | 113671 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000368s00021713.1 | PF06552.7 | TOM20_plant | 8 | 192 | 8.40E-88 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.076 |
| SRR1783600 | control | 29.793 |
| SRR1783602 | moderate drought stress | 26.280 |
| SRR1811619 | moderate drought stress | 26.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.058 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.474 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.283 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.310 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.699 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.228 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.067 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 93.789 |
| SRR2868004 | Drought Stress (root) | 62.422 |
| SRR2967015 | Control (root) | 54.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.738 |
| SRR9715740 | Leaf | 42.266 |
| SRR9715741 | Leaf | 36.265 |
| SRR9715739 | Root | 45.177 |
| SRR9715742 | Root | 37.425 |
| SRR9715743 | Root | 36.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 109.946 |
| SRR8749028 | MeJA induced 9h | 59.488 |
| SRR8749029 | MeJA induced 9h | 58.669 |
| SRR8749030 | Uninduced | 27.074 |
| SRR8749031 | Uninduced | 14.969 |
| SRR8749032 | Uninduced | 19.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 77.374 |
| SRR8400027 | Control - Root | 67.326 |