Gene detail information of Glyur000367s00029069 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37650.1 | 0 | GRAS family transcription factor |
| NR | KEH22901.1 | 0 | GRAS family transcription factor [Medicago truncatula] |
| Swissprot | tr|O80933|SCL9_ARATH | 0 | Scarecrow-like protein 9 |
| trEMBL | tr|A0A072U0I2|A0A072U0I2_MEDTR | 0 | GRAS family transcription factor {ECO:0000313|EMBL:KEH22901.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00367 | 13756 | 15981 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000367s00029069.1 | PF03514.9 | GRAS | 368 | 739 | 8.10E-109 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.051 |
| SRR1783600 | control | 9.067 |
| SRR1783602 | moderate drought stress | 11.028 |
| SRR1811619 | moderate drought stress | 11.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.287 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.168 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.459 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.263 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.671 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.814 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.876 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.717 |
| SRR2868004 | Drought Stress (root) | 14.671 |
| SRR2967015 | Control (root) | 14.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.099 |
| SRR9715740 | Leaf | 8.877 |
| SRR9715741 | Leaf | 9.899 |
| SRR9715739 | Root | 4.766 |
| SRR9715742 | Root | 15.406 |
| SRR9715743 | Root | 13.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.387 |
| SRR8749028 | MeJA induced 9h | 13.236 |
| SRR8749029 | MeJA induced 9h | 8.061 |
| SRR8749030 | Uninduced | 5.550 |
| SRR8749031 | Uninduced | 4.068 |
| SRR8749032 | Uninduced | 5.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.644 |
| SRR8400027 | Control - Root | 21.956 |