Gene detail information of Glyur000366s00019238 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14010.1 | 1.00E-21 | ralf-like 32 |
| NR | NP_001235977.1 | 7.89E-54 | uncharacterized protein LOC100500295 precursor [Glycine max] |
| Swissprot | tr|O23262|RLF32_ARATH | 1.00E-26 | Protein RALF-like 32 (Precursor) |
| trEMBL | tr|K7L602|K7L602_SOYBN | 1.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G11421.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00366 | 167691 | 168062 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000366s00019238.1 | PF05498.6 | RALF | 53 | 120 | 1.70E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.570 |
| SRR1783600 | control | 9.166 |
| SRR1783602 | moderate drought stress | 9.873 |
| SRR1811619 | moderate drought stress | 10.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.062 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.187 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.459 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.838 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.483 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.051 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.996 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 111.229 |
| SRR2868004 | Drought Stress (root) | 128.295 |
| SRR2967015 | Control (root) | 107.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.867 |
| SRR9715740 | Leaf | 32.894 |
| SRR9715741 | Leaf | 27.971 |
| SRR9715739 | Root | 28.100 |
| SRR9715742 | Root | 51.615 |
| SRR9715743 | Root | 43.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.655 |
| SRR8749028 | MeJA induced 9h | 10.920 |
| SRR8749029 | MeJA induced 9h | 17.255 |
| SRR8749030 | Uninduced | 5.092 |
| SRR8749031 | Uninduced | 2.173 |
| SRR8749032 | Uninduced | 6.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 150.541 |
| SRR8400027 | Control - Root | 143.287 |