Gene detail information of Glyur000366s00019236.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23750.2 | 1.00E-13 | cytokinin response factor 2 |
| NR | XP_003548602.1 | 2.12E-17 | PREDICTED: ethylene-responsive transcription factor CRF4-like [Glycine max] |
| Swissprot | tr|O82503|CRF1_ARATH | 2.00E-15 | Ethylene-responsive transcription factor CRF1 |
| trEMBL | tr|K7MFU3|K7MFU3_SOYBN | 8.00E-18 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G08683.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00366 | 159295 | 163636 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000366s00019236.1 | PF00847.15 | AP2 | 74 | 116 | 3.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.852 |
| SRR1783600 | control | 1.813 |
| SRR1783602 | moderate drought stress | 2.354 |
| SRR1811619 | moderate drought stress | 2.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.716 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.478 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.204 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.647 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.087 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.852 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.674 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.275 |
| SRR2868004 | Drought Stress (root) | 1.328 |
| SRR2967015 | Control (root) | 1.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.606 |
| SRR9715740 | Leaf | 0.933 |
| SRR9715741 | Leaf | 0.677 |
| SRR9715739 | Root | 0.108 |
| SRR9715742 | Root | 0.722 |
| SRR9715743 | Root | 0.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.170 |
| SRR8749028 | MeJA induced 9h | 0.403 |
| SRR8749029 | MeJA induced 9h | 0.759 |
| SRR8749030 | Uninduced | 0.577 |
| SRR8749031 | Uninduced | 1.368 |
| SRR8749032 | Uninduced | 0.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.498 |
| SRR8400027 | Control - Root | 2.859 |