Gene detail information of Glyur000366s00019222 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39235.1 | 3.00E-26 | |
| NR | NP_001237915.1 | 8.52E-42 | uncharacterized protein LOC100527051 [Glycine max] |
| trEMBL | tr|C6T353|C6T353_SOYBN | 3.00E-42 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G46580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00366 | 107459 | 108331 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.327 |
| SRR1783600 | control | 0.263 |
| SRR1783602 | moderate drought stress | 0.773 |
| SRR1811619 | moderate drought stress | 0.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.495 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.859 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.551 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.509 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.107 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.933 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.298 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.137 |
| SRR2868004 | Drought Stress (root) | 4.584 |
| SRR2967015 | Control (root) | 3.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.491 |
| SRR9715740 | Leaf | 2.610 |
| SRR9715741 | Leaf | 5.863 |
| SRR9715739 | Root | 0.120 |
| SRR9715742 | Root | 2.110 |
| SRR9715743 | Root | 2.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.977 |
| SRR8749028 | MeJA induced 9h | 109.773 |
| SRR8749029 | MeJA induced 9h | 248.652 |
| SRR8749030 | Uninduced | 30.769 |
| SRR8749031 | Uninduced | 48.136 |
| SRR8749032 | Uninduced | 133.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.245 |
| SRR8400027 | Control - Root | 2.117 |