Gene detail information of Glyur000366s00019220 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14990.1 | 3.00E-55 | |
| NR | NP_001235318.1 | 1.79E-80 | uncharacterized protein LOC100306456 [Glycine max] |
| trEMBL | tr|C6SZG7|C6SZG7_SOYBN | 7.00E-81 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00366 | 91774 | 94372 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.277 |
| SRR1783600 | control | 5.081 |
| SRR1783602 | moderate drought stress | 5.016 |
| SRR1811619 | moderate drought stress | 5.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.960 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.842 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.312 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.109 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.224 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.759 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.078 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.104 |
| SRR2868004 | Drought Stress (root) | 4.941 |
| SRR2967015 | Control (root) | 5.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.865 |
| SRR9715740 | Leaf | 6.194 |
| SRR9715741 | Leaf | 4.355 |
| SRR9715739 | Root | 1.763 |
| SRR9715742 | Root | 5.503 |
| SRR9715743 | Root | 4.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.104 |
| SRR8749028 | MeJA induced 9h | 7.258 |
| SRR8749029 | MeJA induced 9h | 16.357 |
| SRR8749030 | Uninduced | 1.589 |
| SRR8749031 | Uninduced | 1.279 |
| SRR8749032 | Uninduced | 2.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.684 |
| SRR8400027 | Control - Root | 11.361 |