Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT4G03280.1	1.00E-71	photosynthetic electron transfer C
NR	KHN04299.1	2.00E-112	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Glycine soja]
COG	YP_007083197.1	4.00E-74	Rieske Fe-S protein [Pleurocapsa sp. PCC 7327]
Swissprot	tr\|Q69S39\|UCRIA_ORYSJ	3.00E-102	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic (Precursor)
trEMBL	tr\|I1LUB3\|I1LUB3_SOYBN	7.00E-113	Cytochrome b6-f complex iron-sulfur subunit {ECO:0000256\|RuleBase:RU004496}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold00365	66310	67791	-

Gene family	subfamily
--	--

KO	Enzyme	Enzyme ID	pathway	mapID
K02636	petC	EC:1.10.9.1	Photosynthesis	map00195

biological_process
GO:0055114 oxidation-reduction process

cellular_component

GO:0042651 thylakoid membrane

molecular_function

GO:0008121 ubiquinol-cytochrome-c reductase activity

GO:0009496 plastoquinol--plastocyanin reductase activity

GO:0016491 oxidoreductase activity

GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors

GO:0051537 2 iron, 2 sulfur cluster binding

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000365s00022123.1	PF08802.5	CytB6-F_Fe-S	48	72	1.70E-07
Glyur000365s00022123.1	PF00355.21	Rieske	117	179	2.50E-16

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.009
DRR006520	Root Summer glycyrrhizin high producing strain	1.907
DRR006521	Root Winter glycyrrhizin high producing strain	0.971
DRR006522	Root Winter glycyrrhizin high producing strain	0.735
DRR006523	Root Summer glycyrrhizin low producing strain	1.643
DRR006524	Root Summer glycyrrhizin low producing strain	1.423
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.216
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.327

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.090
SRR8400027	Control - Root	1.366