Gene detail

Gene detail information of Glyur000365s00022122

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G05120.1	1.00E-125	Major facilitator superfamily protein
NR	XP_004507230.1	0	PREDICTED: equilibrative nucleotide transporter 3-like [Cicer arietinum]
Swissprot	tr\|Q9M0Y3\|ENT3_ARATH	5.00E-169	Equilibrative nucleotide transporter 3
trEMBL	tr\|A0A072TIZ8\|A0A072TIZ8_MEDTR	0	Equilibrative nucleoside transporter 6 {ECO:0000313\|EMBL:KEH17554.1}

Sequence

Transcript Sequence

>Glyur000365s00022122.1
ATGGTGAACTGTGAGCCTCCAACACGTCTNCAGGGAAAATATGCAGCAATAGTGGTCTGCTGGCTTCTTGGCAATGGGACTCTTTTCTCTTGGAACAGTATGCTGACGATAGAAGATTACTATGTCTACTTGTTTCCGAAATACCACCCCTCTAGGGTGCTCACTCTTGTATATCAGCCATTTGCATTTGGAACACTAGCAATACTGGCTTACAATGAGGCAAAAATCAATACAAGGATGCGGAACCTGTTCGGATACACTCTCTTTTTCTTGGGAACTTTGTCGGTGTTAATTTTGGATTTAGCAACATCCGGTAAAGGAGGGTTGGGAACTTACATTGGTATATGCGTAATTAGTGCTGCATTTGGAATAGCAGATGCACATGCACAAGGAGGAATGGTGGGAGACCTGTCCTACATGCTTCCAGAATTCATTCAGTCTTACCTTGCTGGTTCTGCAGCATCAGGTGCTCTAACATCGGGTTTGAGGTTAGTTACAAAGGCCGCATTTGAGAATTCTGAGGATGGTCTTCGCAAAGGAGCCATTATGTTCTTTGCCATATCATCATTCTTTGTGCTTCTCTGTCTTGTTCTCTACGCTTTTGTCTTTCCTAAATTACCAATTGTGAAGTACTACCGTTCAAAAGCAGCATCCGAAGGATCCAAAACTGTTTCAGCTGACCTTGCCGCAGGTGGCATCCAGACCTCACCTGAAGGGGCCACAGAAGATTCAAAACAACTTGAGCGCAAAGGAAAAATGCAATTNTTAAGGGAAAACATTGATTATGCACTTGATTTGTTCCTAATATATGTGCTAACACTGTCTATTTTCCCTGGATTCTTATCAGAAGATACTGGATCACACAGTTTAGGTACCTGGTATGCTCTTGTTTTAATTGCTATGTATAATGTGTGTGATCTCATTGGAAGATACATTCCACTCTTGAAAATCCTGAAGTTGGAGTCCAGAAAGTTGATCACCACAGTAGTCGGACCTGAACAAAATGCCTTGGGAAACATGTTGGTGTTGTGTCTTCTTGGAGGTATTTTTACAGGGGTAACACTTGACTGGTTGTGGTTAATAGGTAAAGGATGGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00365	59865	63118	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006810 transport

cellular_component
GO:0016021 integral component of membrane

molecular_function
GO:0005337 nucleoside transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000365s00022122.1	PF01733.13	Nucleoside_tran	115	325	1.20E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.782
SRR1783600	control	0.790
SRR1783602	moderate drought stress	0.702
SRR1811619	moderate drought stress	0.692

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.327
DRR006520	Root Summer glycyrrhizin high producing strain	1.551
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.777
DRR006524	Root Summer glycyrrhizin low producing strain	0.796
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.676
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.647

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.793
SRR2868004	Drought Stress (root)	2.161
SRR2967015	Control (root)	3.268

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.279
SRR9715740	Leaf	0.879
SRR9715741	Leaf	2.002
SRR9715739	Root	0.224
SRR9715742	Root	0.784
SRR9715743	Root	0.367

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.518
SRR8749028	MeJA induced 9h	0.740
SRR8749029	MeJA induced 9h	0.330
SRR8749030	Uninduced	0.477
SRR8749031	Uninduced	0.139
SRR8749032	Uninduced	0.065

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.807
SRR8400027	Control - Root	3.425