Gene detail information of Glyur000365s00022117 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10265.1 | 3.00E-21 | Wound-responsive family protein |
| NR | XP_004487332.1 | 8.46E-36 | PREDICTED: uncharacterized protein LOC101508491 [Cicer arietinum] |
| trEMBL | tr|C6SWS5|C6SWS5_SOYBN | 1.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G45240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00365 | 38786 | 39049 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000365s00022117.1 | PF12609.3 | DUF3774 | 10 | 86 | 2.30E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 87.661 |
| SRR1783600 | control | 85.328 |
| SRR1783602 | moderate drought stress | 9.469 |
| SRR1811619 | moderate drought stress | 9.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 95.623 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 96.371 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1230.307 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1201.816 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.268 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.922 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.968 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.798 |
| SRR2868004 | Drought Stress (root) | 0.254 |
| SRR2967015 | Control (root) | 0.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.184 |
| SRR9715740 | Leaf | 16.553 |
| SRR9715741 | Leaf | 19.073 |
| SRR9715739 | Root | 67.039 |
| SRR9715742 | Root | 80.313 |
| SRR9715743 | Root | 79.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 787.100 |
| SRR8749028 | MeJA induced 9h | 511.226 |
| SRR8749029 | MeJA induced 9h | 476.065 |
| SRR8749030 | Uninduced | 167.525 |
| SRR8749031 | Uninduced | 111.346 |
| SRR8749032 | Uninduced | 304.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.931 |
| SRR8400027 | Control - Root | 110.296 |