Gene detail information of Glyur000365s00022116 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10265.1 | 9.00E-25 | Wound-responsive family protein |
| NR | XP_004507223.1 | 6.47E-48 | PREDICTED: uncharacterized protein LOC101508901 [Cicer arietinum] |
| trEMBL | tr|C6SWS5|C6SWS5_SOYBN | 2.00E-44 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G45240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00365 | 34469 | 37467 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000365s00022116.1 | PF12609.3 | DUF3774 | 53 | 128 | 1.40E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.782 |
| SRR1783600 | control | 16.808 |
| SRR1783602 | moderate drought stress | 3.577 |
| SRR1811619 | moderate drought stress | 3.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 111.792 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 107.895 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 526.295 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 525.101 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.827 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.323 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.792 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.115 |
| SRR2868004 | Drought Stress (root) | 12.258 |
| SRR2967015 | Control (root) | 16.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.735 |
| SRR9715740 | Leaf | 28.146 |
| SRR9715741 | Leaf | 16.782 |
| SRR9715739 | Root | 76.526 |
| SRR9715742 | Root | 90.505 |
| SRR9715743 | Root | 78.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 436.225 |
| SRR8749028 | MeJA induced 9h | 269.094 |
| SRR8749029 | MeJA induced 9h | 337.530 |
| SRR8749030 | Uninduced | 58.396 |
| SRR8749031 | Uninduced | 145.274 |
| SRR8749032 | Uninduced | 282.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 78.812 |
| SRR8400027 | Control - Root | 124.077 |