Gene detail information of Glyur000364s00018055 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21920.1 | 1.00E-05 | |
| NR | AFK48147.1 | 2.12E-28 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T6K5|I3T6K5_LOTJA | 8.00E-29 | Uncharacterized protein {ECO:0000313|EMBL:AFK48147.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00364 | 132404 | 132706 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000364s00018055.1 | PF14009.1 | DUF4228 | 32 | 99 | 3.60E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.843 |
| SRR1783600 | control | 0.849 |
| SRR1783602 | moderate drought stress | 0.880 |
| SRR1811619 | moderate drought stress | 0.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.784 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.919 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.149 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.365 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.458 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.209 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.186 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.227 |
| SRR2868004 | Drought Stress (root) | 33.112 |
| SRR2967015 | Control (root) | 22.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.588 |
| SRR9715740 | Leaf | 5.330 |
| SRR9715741 | Leaf | 7.385 |
| SRR9715739 | Root | 1.113 |
| SRR9715742 | Root | 1.368 |
| SRR9715743 | Root | 2.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.211 |
| SRR8749028 | MeJA induced 9h | 2.270 |
| SRR8749029 | MeJA induced 9h | 2.341 |
| SRR8749030 | Uninduced | 1.063 |
| SRR8749031 | Uninduced | 0.600 |
| SRR8749032 | Uninduced | 1.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.490 |
| SRR8400027 | Control - Root | 4.025 |