Gene detail information of Glyur000364s00018044 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G04630.1 | 9.00E-19 | Protein of unknown function, DUF584 |
| NR | XP_007142288.1 | 1.99E-64 | hypothetical protein PHAVU_008G268000g [Phaseolus vulgaris] |
| trEMBL | tr|V7B8Z8|V7B8Z8_PHAVU | 7.00E-65 | Uncharacterized protein {ECO:0000313|EMBL:ESW14284.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00364 | 73485 | 74105 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000364s00018044.1 | PF04520.8 | Senescence_reg | 23 | 206 | 4.40E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.255 |
| SRR1783600 | control | 5.354 |
| SRR1783602 | moderate drought stress | 6.911 |
| SRR1811619 | moderate drought stress | 7.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.500 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.015 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.012 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.948 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.425 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.567 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.457 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.962 |
| SRR2868004 | Drought Stress (root) | 1.817 |
| SRR2967015 | Control (root) | 1.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.577 |
| SRR9715740 | Leaf | 9.406 |
| SRR9715741 | Leaf | 2.981 |
| SRR9715739 | Root | 3.147 |
| SRR9715742 | Root | 2.378 |
| SRR9715743 | Root | 2.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.464 |
| SRR8400027 | Control - Root | 3.685 |