Gene detail information of Glyur000364s00018039 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55050.1 | 6.00E-94 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| NR | XP_003617573.1 | 0 | GDSL esterase/lipase [Medicago truncatula] |
| COG | YP_523580.1 | 5.00E-22 | lipolytic enzyme, G-D-S-L [Albidiferax ferrireducens T118] |
| Swissprot | tr|Q9FIA1|GDL87_ARATH | 3.00E-114 | GDSL esterase/lipase At5g55050 (Precursor) |
| trEMBL | tr|G7K3K0|G7K3K0_MEDTR | 0 | GDSL-like lipase/acylhydrolase {ECO:0000313|EMBL:AET00532.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00364 | 31035 | 36526 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000364s00018039.1 | PF00657.17 | Lipase_GDSL | 36 | 349 | 1.10E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.360 |
| SRR1783600 | control | 3.280 |
| SRR1783602 | moderate drought stress | 1.543 |
| SRR1811619 | moderate drought stress | 1.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.966 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.292 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.361 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.718 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.105 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 69.061 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 69.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.460 |
| SRR2868004 | Drought Stress (root) | 2.408 |
| SRR2967015 | Control (root) | 2.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.732 |
| SRR9715740 | Leaf | 24.036 |
| SRR9715741 | Leaf | 20.946 |
| SRR9715739 | Root | 0.859 |
| SRR9715742 | Root | 12.062 |
| SRR9715743 | Root | 9.407 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.289 |
| SRR8749028 | MeJA induced 9h | 0.078 |
| SRR8749029 | MeJA induced 9h | 0.215 |
| SRR8749030 | Uninduced | 0.261 |
| SRR8749031 | Uninduced | 0.039 |
| SRR8749032 | Uninduced | 0.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.393 |
| SRR8400027 | Control - Root | 3.102 |