Gene detail information of Glyur000363s00015377 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G09590.1 | 0 | mitochondrial HSO70 2 |
| NR | XP_006471142.1 | 0 | PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Citrus sinensis] |
| COG | YP_003695916.1 | 0 | chaperone protein DnaK [Starkeya novella DSM 506] |
| Swissprot | tr|P37900|HSP7M_PEA | 0 | Heat shock 70 kDa protein, mitochondrial (Precursor) |
| trEMBL | tr|A0A067DEE6|A0A067DEE6_CITSI | 0 | Uncharacterized protein {ECO:0000313|EMBL:KDO41173.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00363 | 150918 | 153560 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000363s00015377.1 | PF00012.15 | HSP70 | 31 | 259 | 1.90E-106 |
| Glyur000363s00015377.1 | PF00012.15 | HSP70 | 446 | 542 | 3.70E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.044 |
| SRR1783600 | control | 31.227 |
| SRR1783602 | moderate drought stress | 30.955 |
| SRR1811619 | moderate drought stress | 31.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.759 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.259 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 55.041 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 55.314 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 84.148 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 82.651 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.817 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 100.747 |
| SRR2868004 | Drought Stress (root) | 73.543 |
| SRR2967015 | Control (root) | 65.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 53.170 |
| SRR9715740 | Leaf | 76.432 |
| SRR9715741 | Leaf | 58.494 |
| SRR9715739 | Root | 21.861 |
| SRR9715742 | Root | 94.217 |
| SRR9715743 | Root | 81.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 207.497 |
| SRR8749028 | MeJA induced 9h | 79.683 |
| SRR8749029 | MeJA induced 9h | 145.400 |
| SRR8749030 | Uninduced | 26.159 |
| SRR8749031 | Uninduced | 27.636 |
| SRR8749032 | Uninduced | 41.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 89.082 |
| SRR8400027 | Control - Root | 77.935 |