Gene detail

Gene detail information of Glyur000363s00015373

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G09620.1	6.00E-56	Octicosapeptide/Phox/Bem1p family protein
NR	XP_004504874.1	0	PREDICTED: uncharacterized protein LOC101493112 [Cicer arietinum]
trEMBL	tr\|V7CPM2\|V7CPM2_PHAVU	9.00E-177	Uncharacterized protein {ECO:0000313\|EMBL:ESW31175.1}

Sequence

Transcript Sequence

>Glyur000363s00015373.1
ATGGAGAACTATCAGTATCCAGCGTCATATCCAGATTCCGGCGAGTCATCGCCGCGGTCGAGGGAGATCGAATTCGAGAACCCAACGCCATGGGAAGAGCAGCAGCAGCAGCAGCAGAGCTACAAGGCGAAGTTCATGTGCAGCTACGGCGGTAAGATCCAGCCTCGCAGCCACGACAACCAGCTCTCCTACGTCGGGGGCGACACCAAGATATTCGCCGTCGACCGCAACACCAAGTTCCACGCCTTCATCTCCAAGCTCTCCGCCCTCTGCGGCGACGCCGCAACCACCACCCCACAGGAGGTGAGCTTCAAGTACCAGCTCCCCGGCGAGGATCTCGACGCTCTAATCTCCGTCTCCAACGACGACGACCTCGAACACATGATGCACGAGTACGATCGCCTCTATCGCCCTTCCTCAAAACCCGTTCGAATGAGACTCTTCATCTTCACCAATCCCGTTACTCCTCCCCAACAACAACAACAACTACAACAACCCGAACCCCTCAAACCTCCTAACTCCAACAATAACCTCGATTTCCTCTTCGGCCTCGACAACAAGCCCCTCGCTCCTCCTCCTCCTCCTCCGCATCCTCCTCTCGCTCCGTCNCAGGAATATTCTTCCCGTGGATCCGCCGCCGATCGGGATCCCGTCGACATTCAGGCGCAGTTTCAGCGCTTGCAGATTTCTGACACTGACCAGTCTTTGTATCGCAGGAGAAGTGAAGACGGGTTCTCCCACTCCGGTGGCGGCGATTATTACTTGCCGGAGAAGGTTGCGCCGTCTACTTCCCCGGCGGCCGCGGTTCCCAATCATGCCGGTTATTGGCCGGACAAGCAGTTTTCCGGCGAGGGTTTTACAGGAGCCGGAGGAGGGGACCAGCCGGTTTATGTGATTCAGGCGCCGGGGACGTTCTACCACGCGCCGATGGCTCGTCCTCCGGCGCCGACGGTGACACAGGGGTACTATGTGCAGAGAATGGCCTCTGATGGTTACAGGGAACAACAGCAGCCGGTGTACGGNGGCGTTCCGCAACCGAAGGCGGCGTTTTCGTCGGCGGGTCCAGCTCAGACGGTGAGACCTTCGGGGTACGCGGATGGATACGGCGTCGTTCGGCAAGCTGGTGTGCCGGATAATGCGTACGCGCAGGTGGCGTATGATAGTGCTAGTGGGAGACAGGTCTACTATACTGCGCCGGGAGGGATGGTCCACGCGCCTCCGTACCAAGGGGTTGGTCCAGTTGTCGGCAATGACATGAGACCGGTTGGGGTTCCGTTGGGCCAGGATGGTAAAGGGGTAAACAAGGTTTCACAAGGTTCTGTGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00363	125813	127138	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000363s00015373.1	PF00564.19	PB1	59	150	1.50E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	146.427
SRR1783600	control	145.753
SRR1783602	moderate drought stress	469.621
SRR1811619	moderate drought stress	462.131

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	335.608
DRR006520	Root Summer glycyrrhizin high producing strain	364.007
DRR006521	Root Winter glycyrrhizin high producing strain	83.965
DRR006522	Root Winter glycyrrhizin high producing strain	82.777
DRR006523	Root Summer glycyrrhizin low producing strain	385.751
DRR006524	Root Summer glycyrrhizin low producing strain	383.989
DRR006525	Leaf Summer glycyrrhizin high producing strain	57.664
DRR006526	Leaf Summer glycyrrhizin high producing strain	57.879

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	60.416
SRR2868004	Drought Stress (root)	88.405
SRR2967015	Control (root)	113.080

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	68.998
SRR9715740	Leaf	73.344
SRR9715741	Leaf	78.364
SRR9715739	Root	727.210
SRR9715742	Root	386.977
SRR9715743	Root	430.376

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	50.244
SRR8749028	MeJA induced 9h	51.593
SRR8749029	MeJA induced 9h	48.377
SRR8749030	Uninduced	26.239
SRR8749031	Uninduced	7.680
SRR8749032	Uninduced	20.535

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	178.181
SRR8400027	Control - Root	212.782