Gene detail

Gene detail information of Glyur000363s00015366

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G04850.2	0	K+ efflux antiporter 3
NR	XP_004504879.1	0	PREDICTED: K(+) efflux antiporter 3, chloroplastic-like [Cicer arietinum]
COG	YP_004985427.1	4.00E-99	glutathione-regulated potassium-efflux system (K(+)/H(+) antiporter) [Azospirillum brasilense Sp245]
Swissprot	tr\|Q9M0Z3\|KEA3_ARATH	0	K(+) efflux antiporter 3, chloroplastic
trEMBL	tr\|I1KL77\|I1KL77_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G30360.1}

Sequence

Transcript Sequence

>Glyur000363s00015366.1
CGACGCTTTNGTTTTCTCAGAGTTTTCTATCACGTTTCTACCCCTCTTCTTCCTACGTCTACGTGTGCCTCTGTCCTCCTCCACTTTCTGAGGCATCGACATTAGGGGACTACACTTTCAAGCTCATTTTAATTTTTGTATTTTTTTTTTATCTCTCAACATACTTCAAATTCTATCTGGGTGTCNATACTCTAAGCGGGACAAACAAACGCAAATGAACTTCCCCAAATTGGGTTTCATTGCTTCATGACCACTCCCAATACCACTATGTTGGAGTCCTTGCTCTGTTGCCAAAGCCTCAAGGGGTACTATGACTTGACCAAACAAAAGAGTCCTGGTTATTCTCGTGCCCTTTCACCAATTTGTAGAAGTTCTACTTCCATGTTCATGCTTTGTTCAGTTGACAAGCAAGTGCCGCTACTGTCACAATCACAAGGTGCAAGTCACGGGGTATTTCACAGTAACAATGGTGCTACCGTGTCACAAAATTTCACTAAAAGGGCACCCCTCGATGTTCCTTCGTTTTCTGGTTGGAAAGGATCCTGTTTCTCCAAGTATAATAAGGCACTACGATGGGAACGGCTGCAGACATGTGTGGCATATGATGTTGCTGGTGCTGTTGAGGTCATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCCGTGACTGTCTTAATCGTGCCCACATTCAAATCAATTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGGAACCTTACAGATGTTAAGGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAACTTTCACTAGCACGTCTGAAAGCTCTTGCAAAATATGCCTTTGGAATGGGATTGGCTCAGGTTGTACTATCTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGGGCTATTGGAACAAAAATTTTGGAATTCCTTTTCCACTCAAGGCCTGATCTGGTGAACATCAGAAGTGTCGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCTCTNTCGTCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGCGAGCTTCCTACAAAGTTTGGNTCAGCAACTCTTGGAATACTTCTTTTGCAGGACGTAGCTGTTGTCCCTCTTTTGGTCATACTTCCAGTACTTGAGAGCCAGAATATGGCTGAGGGAAGCATTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTTGGAGCAAAGTATATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGTTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTGTTGCAGGGACTTCACTAGTCACACAGAACTTGGGCTTCAGTGATACGCTTGGAGCATTTTTAGCTGGGGCAATCTTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCGTTTAGAGGCTTGCTGCTTGGGTTGTTTTTTCTAACTACAGGGACTTCAATTGACATGCAGCTCCTCTTGCGAGAGTGGCCAAATGTACTTGCGCTCTTAGGGGGTTTAATTACTATCAAGACATTGATCATAACTGCGATTGGTCCTCGTGTGGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGCATTTGTAGTATTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCACTTGAACTCAACAAGCTGCTCATAATTGTTGTTGTATTATCAATGGCATTAACCCCTTTTCTGAATGAAGCTGGAAGGAGGGCTGCTAGTTTTATTGAAGACAAGTCTGATGCTGAGAATAAACAGAAAGAGTCTGAGATGGTTAACTTCAATGCTAGTGAACCTGTTGTTATCCTTGGATTTGGAGAAATGGGCCAGGTCCTTGCCAATTTCCTGTCCAACCCATTGGCTTCCGGAGGAGATAGTGATGCAATAGTAGGATGGCCTTATGTGGCGTTTGATCTTGACCCCATGGTTGTAAAGGATGCTAGAAAACTTGGTTTTCAAATTCTCTATGGGGATGGATCGCGTCCATCTGTTCTTCAATCTGCTGGTATTTCTTCTCCAAAAGCTATCATGGTTATGTACACTGGGAAGAAGATGACACTTGAAGCTATTCAGAGGCTACGATTGACTTTTCCTGCAGTCCCAATATATGCCAGAGCTCGAGATCTCAAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACGGATGCCATTTTGGAAAATGCAGAGACTAGCTTACAGCTGGGTTCTAAGCTGTTGAAAGGCCTTGGGGTGATGTCTGATGATGTAGCATTTTTGAGTCAGCTTATTAGAGATTCCATGGAGCTACAAGCCCAAGAACCAATCAGCCAATCAGAAGATCATGAATTAAATATTATGAAACCGCTGCAGGTGAGAGTTGCTGACCTGACGGAGGCACGTGTTCCNAAGGCAACCACTTTGGCAAGTTATGAAATATCAGTACGGAAGCAGATGGATCAAGCTTCATTGGGTGGGATTCAGAAGGGAGTAGATCCTGAAGAACAAGATTATGAACTAAATCAAGCTGTTAAATTAGAAGGAAATGGCGTTTCTTGTAGCAAACAAGGTACTGAAGAAAGCTCAATGGTTGGATCTCAAGATGCTGTAGGACAGAAGAATCTGCTTGACCCATCAATCCCTTCCCATACTGCCATGGAGGAACCCTGACAATGTAGGTAGGGATTTTTCCCATTAATTTTACGCCTCTACTAACCCTACAACTTCAGAAAGATTTGACGAAGTTGCCATTTTTATTGCTGAGCTAACAGTATATGTATAGAAAATATCTCAATTTAAGAGTTTGTAACAAAGCATCATTCAAACTGAGATGCTCATTTCAATTCTTTGAAAACCACAAAATGTATAGTGACTTTACATTGATGAAAAATAATTTTCATTTCTTGCGCGCCTTTGTAAACAGTTGAACATGTTATCAGCTTTGGAGTTTAAAACATGGCAACACATAATCAACAATTATTGTAGGAACAAGTGCTCATTAGGAAAGAGCCCTGCAGCAAAACTACTTCAAGTCTTCGTAAAAACAGATCACCATAAGCCATCCCACAGTATATGCAACCACCAGTGCTAGATGAACTGCTAACACCTAACAGCCACCAAAACCAAAGAACAAACATAAGTAACACA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00363	92199	101849	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006812 cation transport

GO:0006813 potassium ion transport

GO:0055085 transmembrane transport

cellular_component
GO:0016021 integral component of membrane

molecular_function
GO:0015299 solute:proton antiporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000363s00015366.1	PF00999.16	Na_H_Exchanger	138	522	1.00E-71
Glyur000363s00015366.1	PF02254.13	TrkA_N	556	681	2.40E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.509
SRR1783600	control	0.487
SRR1783602	moderate drought stress	0.527
SRR1811619	moderate drought stress	0.514

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.736
DRR006520	Root Summer glycyrrhizin high producing strain	0.723
DRR006521	Root Winter glycyrrhizin high producing strain	2.674
DRR006522	Root Winter glycyrrhizin high producing strain	2.675
DRR006523	Root Summer glycyrrhizin low producing strain	1.157
DRR006524	Root Summer glycyrrhizin low producing strain	1.166
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.933
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.877

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.908
SRR2868004	Drought Stress (root)	5.204
SRR2967015	Control (root)	4.972

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	77.878
SRR9715740	Leaf	97.561
SRR9715741	Leaf	70.745
SRR9715739	Root	0.595
SRR9715742	Root	1.089
SRR9715743	Root	1.117

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.322
SRR8749028	MeJA induced 9h	11.164
SRR8749029	MeJA induced 9h	7.874
SRR8749030	Uninduced	7.354
SRR8749031	Uninduced	9.608
SRR8749032	Uninduced	4.999

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.516
SRR8400027	Control - Root	3.975