Gene detail information of Glyur000362s00017683 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47900.7 | 6.00E-86 | Protein of unknown function (DUF1624) |
| NR | XP_004489125.1 | 1.00E-160 | PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like isoform X1 [Cicer arietinum] |
| COG | YP_007146222.1 | 3.00E-25 | hypothetical protein Cylst_1247 [Cylindrospermum stagnale PCC 7417] |
| trEMBL | tr|I3SPG2|I3SPG2_LOTJA | 2.00E-154 | Uncharacterized protein {ECO:0000313|EMBL:AFK42154.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00362 | 171285 | 180167 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000362s00017683.1 | PF07786.7 | DUF1624 | 79 | 203 | 7.40E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.318 |
| SRR1783600 | control | 21.562 |
| SRR1783602 | moderate drought stress | 23.335 |
| SRR1811619 | moderate drought stress | 22.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.691 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.245 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 651.535 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 635.828 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.743 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.184 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 92.568 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 92.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 72.073 |
| SRR2868004 | Drought Stress (root) | 104.740 |
| SRR2967015 | Control (root) | 72.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.018 |
| SRR9715740 | Leaf | 66.914 |
| SRR9715741 | Leaf | 24.635 |
| SRR9715739 | Root | 3.189 |
| SRR9715742 | Root | 9.705 |
| SRR9715743 | Root | 8.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.059 |
| SRR8749028 | MeJA induced 9h | 6.026 |
| SRR8749029 | MeJA induced 9h | 4.588 |
| SRR8749030 | Uninduced | 0.849 |
| SRR8749031 | Uninduced | 0.233 |
| SRR8749032 | Uninduced | 1.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.698 |
| SRR8400027 | Control - Root | 25.963 |