Gene detail

Gene detail information of Glyur000362s00017678

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G16080.1	1.00E-92	carboxyesterase 17
NR	XP_003530910.1	0	PREDICTED: probable carboxylesterase 17-like [Glycine max]
COG	YP_007550375.1	3.00E-21	hypothetical protein AZKH_1068 [Azoarcus sp. KH32C]
Swissprot	tr\|Q9LFR7\|CXE17_ARATH	3.00E-114	Probable carboxylesterase 17
trEMBL	tr\|I1KZK3\|I1KZK3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G47930.1}

Sequence

Transcript Sequence

>Glyur000362s00017678.1
ATGGCTGCAATTTCACTCAGGTACAACAACCCACAAGTAAACAACAACAACATTCACCAGCAACGTGGAGGAGCCACAAGTGAAGAAATCGAAGGACTCATAAGAGTTCACAGAGATGGGCGTGTTGAAAGGCCACAAATTGTGCCACGTGTCTCATGCACATCAGAACACGGTGTCACTTCCAGAGATGTTGTGATCAACAAAGAGACCAATTTATGGGCACGTGTCTATGTCCCATTATCAAATTCTTCAAGTTCCCACGGATTAAAGCTTCTTCCTTTGGTTGTTTACTTCCACGGTGGTGGATTCTGTGTTGGCTCTGCATCTTGGAGCTGTTACCATGAGTTCTTAACCAACCTTGCTTCCAAAGCAAACTGTGTCATTCTCTCTTTGGAGTACCAGTTAGCTCCAGAGAATCGTTTACCTGTTGCATATGATGATGGTTTCAATGCTCTCATGTGGGTGAAACGTGAGGCCATAAATTCATCAAGTGTTCAAAAGTGGTGGCTTAGTCATTGCAACCTTTCTTCCCTGTTCCTAGCCGGTGACAGTGCAGGGGCCAACATAGCTTACAATGTGGCCACCCGCATAGGATCATCACCATTTGAGAGTCCCCCTTCGACTAGAGATACCACCAACGCAGTCCTTGTAAAGCAGTATCCTTTATTGTCTGTTAAAGGTGTTATCTTGATCCAACCTTTCTTTGGAGGAGAGGAAAGAACTCTATCTGAGAAGCATTCACATAATCAGCCACCAAATTCAGCGCTTACTTTGTCAGTTTCTGATACTTATTGGCGCTTAGCGCTTCCTCTTGGAGCTAACCGTGACCATTCCTATTGTAACCCTCTTTCACAACGTGGGTTGGCCAAGTTGAGGGATCTGAAGCTTCCACCTGTTATGGTGTGCGTTTCTGAAATGGATATACTCAGAGACAGAAACTTTGAGTTCTCAAATGCTTTGGCTAGAGCTGGGAAAAGGGTTGAAACGGTTGTGTACAAAGGTGTTGGACATGCATTCCAAGTTCTGCATAACTATCAGCTTTCCCATTATCGTACCCAAGAAATGATGTCTCATATTAAGGACCTTCCTCAACCATATACTTTATTCGATCTTTCTTTAGAAATTGTCTTTAACCAGCCGCATTCTTGTGTGAGTACGATCGAGTCCTATAAGAAGTGGTCTCTTCGGAACAGGGTTATTATTTCAGAAGGGAATATGAGTCAGAGGTCAGAGGGCTTCTCTAAAAGGAAAGATGCTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00362	140827	142960	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000362s00017678.1	PF07859.8	Abhydrolase_3	95	340	7.80E-57

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.029
SRR1783600	control	0.111
SRR1783602	moderate drought stress	0.105
SRR1811619	moderate drought stress	0.105

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.376
DRR006520	Root Summer glycyrrhizin high producing strain	0.338
DRR006521	Root Winter glycyrrhizin high producing strain	1.537
DRR006522	Root Winter glycyrrhizin high producing strain	1.288
DRR006523	Root Summer glycyrrhizin low producing strain	8.345
DRR006524	Root Summer glycyrrhizin low producing strain	8.746
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.404
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.133

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.084
SRR2868004	Drought Stress (root)	0.215
SRR2967015	Control (root)	0.673

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.548
SRR9715740	Leaf	9.700
SRR9715741	Leaf	20.503
SRR9715739	Root	0.749
SRR9715742	Root	1.872
SRR9715743	Root	2.330

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	23.311
SRR8749028	MeJA induced 9h	27.436
SRR8749029	MeJA induced 9h	20.172
SRR8749030	Uninduced	37.563
SRR8749031	Uninduced	16.062
SRR8749032	Uninduced	30.776

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.217
SRR8400027	Control - Root	0.105