Gene detail

Gene detail information of Glyur000362s00017677

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G16080.1	1.00E-88	carboxyesterase 17
NR	XP_003530910.1	0	PREDICTED: probable carboxylesterase 17-like [Glycine max]
COG	YP_007550375.1	4.00E-16	hypothetical protein AZKH_1068 [Azoarcus sp. KH32C]
Swissprot	tr\|Q9LFR7\|CXE17_ARATH	4.00E-108	Probable carboxylesterase 17
trEMBL	tr\|I1KZK3\|I1KZK3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G47930.1}

Sequence

Transcript Sequence

>Glyur000362s00017677.1
ATGGCTGCAATTTCACTAAGGCACAACAACCCACAAGTAAACAACAACATTCACCAGCAACGTGGAGGAGCCACAAGTGAAGAAATCGAAGGACTCATAAGAGTTCACAGAGATGGGCGTGTTGAAAGGCCACAAATTGTGCCACGTGTCTCATGCACAACTGAACACGGTGTCACTTCCAGAGATGTTGTGATCAACAAAGAGACCAATTTATGGGCACGTGTCTATCTTCTTCCTTTGGTTGTTTACTTCCACGGTGGTGGATTCTGTGTTGGCTCTGCATCTTGGAGCTGTTACCATGAGTTCTTAACCAACCTTGCTTCCAAAGCAAACTGTGTCATTCTCTCTTTGGAGTACCAGTTAGCTCCAGAGAATCGTTTACCTGTTGCATATGATGATGGTTTCAATGCTCTCATGTGGGTGAAACGTGAGGCCATAAATTCATCAAGTGTTCAAAAGTGGTGGCTTAGTCATTGCAACCTTTCTTCCCTGTTCCTAGCCGGTGACAGTGCAGGGGCCAACATAGCTTACAATGTGGCCACCCGCATGGGATCATCACCATTTGAGAGTCCCCCTTCGACTAGAGATACCACCAACGCAGTCCTTGTAAAGCAGTATCCTTTATTGTCTGTTAAAGGTGTTATCTTGATCCAACCTTTCTTTGGAGGAGAGGAAAGAACTTTATCTGAGAAGCATTCACATAATCAGCCACCAAATTCAGCGCTTACTTTGTCAGTTTCTGATACTTATTGGCGCTTAGCGCTTCCTCTTGGAGCTAACCGTGACCATTCCTATTGCAACCCTCTTTCACAACATGGGTTGGCCAAGTTGAGGGATACGAGGCTTCCACCTGTTATGGTAGACAGAAACTTTGAGTTCTCAAATGCTTTGGCTAGAGCTGGGAAAAGGGTTGAAACTGTTGTGTACAAAGGTGTTGGACATGCATTCCAAGTTCTGCATAACTATCAGCTTTCCCATTATCGTACCCAAGAAATGATGTCTCATATCAGGACCTTTCTCAACCAGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00362	119610	120704	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000362s00017677.1	PF07859.8	Abhydrolase_3	81	317	5.50E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.075
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.021
SRR1811619	moderate drought stress	0.018

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.205
DRR006520	Root Summer glycyrrhizin high producing strain	0.221
DRR006521	Root Winter glycyrrhizin high producing strain	4.753
DRR006522	Root Winter glycyrrhizin high producing strain	4.789
DRR006523	Root Summer glycyrrhizin low producing strain	5.506
DRR006524	Root Summer glycyrrhizin low producing strain	4.967
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.834
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.750

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.003
SRR2868004	Drought Stress (root)	0.198
SRR2967015	Control (root)	0.537

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.844
SRR9715740	Leaf	1.419
SRR9715741	Leaf	3.816
SRR9715739	Root	0.229
SRR9715742	Root	1.701
SRR9715743	Root	1.480

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	21.928
SRR8749028	MeJA induced 9h	31.393
SRR8749029	MeJA induced 9h	16.857
SRR8749030	Uninduced	35.012
SRR8749031	Uninduced	8.360
SRR8749032	Uninduced	14.590

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.089
SRR8400027	Control - Root	0.108