Gene detail

Gene detail information of Glyur000361s00013177.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G63400.1	5.00E-120	adenylate kinase 1
NR	XP_008239440.1	5.10E-166	PREDICTED: adenylate kinase B [Prunus mume]
COG	YP_004514871.1	5.00E-71	adenylate kinase [Methylomonas methanica MC09]
Swissprot	tr\|Q08480\|KAD4_ORYSJ	8.00E-167	Adenylate kinase 4
trEMBL	tr\|A0A067KGH5\|A0A067KGH5_JATCU	4.00E-166	Uncharacterized protein {ECO:0000313\|EMBL:KDP30944.1}

Sequence

Transcript Sequence

>Glyur000361s00013177.1
CGAAGGGCAATAAGGTAAATACGGAGGTCGAGGATGTGAGTTGGTAGGCATCGTATAGAGTCCGAAGGTGGTTTAGAAGAGGGAGAAGTGAGAACCAAGTTAGCGTTGTCTTGTTTGAGACTTGNGAACCTCGTTTCATTCATTCGATTGTTGTTTTGTACCCACGTTTCGTTTCTGCACTGACACACACACAACACCACAATGGCCACCTCAAGCAGTGCACCCAATTTGGAAGATGTTCCTTCCCTCGATCTCATGTCGGAGCTTCTCCGTCGCATGAAGTGCTCCTCCAAGCCCGACAAGCGTCTCATTCTCGTTGGTCCACCTGGGTCAGGAAAAGGCACACAGTCACCAATCATAAAGGACGAGTACTGCTTGTGCCACTTAGCTACCGGTGATATGTTAAGAGCAGCTGTGGCAGCTAAAACCCCTCTTGGTATTAAAGCTAAAGAAGCTATGGATAAGGGAGAACTTGTTTCTGATGACTTAGTTGTTGGCATTATAGATGAAGCAATGAAGAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTTCCACGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTAGGAAAGCAAGGAGTTAAAGTTGATAAGGTTCTCAATTTTGCAATTGATGATGCAATCCTGGAGGAGCGGATTGCTGGCCGCTGGATACACCCATCCAGTGGCAGAACCTACCATACAAAATTTGCACCCCCCAAGGTTCCCGGGGTTGATGATGTTACTGGTGAACCTCTTATTCAGCGCAAGGATGACACAGCAGCTGTTCTTAAGTCAAGACTGGAGGCATTCCACAAGCAAACTGAACCGGTTATTGATTACTATTCAAAGAAGGGCATTGTTGCTAATCTTCCTGCTGAGAAACCTCCCAAAGAGGTGACAGCTGAAGTGGAGAAGGTGCTGTCTTCATAGAGTTGGCTCTTGGCCCCTCCAGTCCAGCTTGTTATGCAATTGTTTTGTCATTATGTACTTTAATATACATACTTTAAATTTGCTTACCCTTCAGCTTTTACGGAAATGCAAATGCCGGCGGCTGTTCTCAAACTCGAAGTTGAAGAGTTACTTGGATGAAATAAAAGTTCGATGGAATGTAACTTTTTACTTTTGGATTATACTAGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00361	168979	172299	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00939	adk, AK	EC:2.7.4.3	Purine metabolism	map00230
			Thiamine metabolism	map00730

Gene Ontology

biological_process
GO:0006139 nucleobase-containing compound metabolic process

molecular_function

GO:0004017 adenylate kinase activity

GO:0005524 ATP binding

GO:0016776 phosphotransferase activity, phosphate group as acceptor

GO:0019205 nucleobase-containing compound kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000361s00013177.1	PF00406.17	ADK	38	223	9.00E-59
Glyur000361s00013177.1	PF05191.9	ADK_lid	160	195	3.50E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	58.655
SRR1783600	control	58.658
SRR1783602	moderate drought stress	41.734
SRR1811619	moderate drought stress	41.485

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	47.635
DRR006520	Root Summer glycyrrhizin high producing strain	46.517
DRR006521	Root Winter glycyrrhizin high producing strain	19.899
DRR006522	Root Winter glycyrrhizin high producing strain	19.074
DRR006523	Root Summer glycyrrhizin low producing strain	46.072
DRR006524	Root Summer glycyrrhizin low producing strain	45.221
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.551
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.677

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	51.919
SRR2868004	Drought Stress (root)	29.489
SRR2967015	Control (root)	29.722

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	38.504
SRR9715740	Leaf	34.247
SRR9715741	Leaf	31.422
SRR9715739	Root	31.324
SRR9715742	Root	30.565
SRR9715743	Root	30.515

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	70.141
SRR8749028	MeJA induced 9h	67.350
SRR8749029	MeJA induced 9h	59.760
SRR8749030	Uninduced	42.142
SRR8749031	Uninduced	14.126
SRR8749032	Uninduced	23.822

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	44.057
SRR8400027	Control - Root	43.189