Gene detail

Gene detail information of Glyur000361s00013175

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G14210.1	8.00E-158	Leucine-rich repeat protein kinase family protein
NR	XP_003528113.1	0	PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like isoform X1 [Glycine max]
COG	YP_004775215.1	2.00E-24	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q8LFN2\|Y3037_ARATH	7.00E-126	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (Precursor)
trEMBL	tr\|K7KVK0\|K7KVK0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G18010.2}

Sequence

Transcript Sequence

>Glyur000361s00013175.1
ATGGGGTTTCATGGCTTTGTTTTGGTATTCTGTTCTGCTTGGTGTGTCTTCTACTATGTGGGGAGTTGCAGTGCTCAGTTGCAGTCATCNCAGACCCAAGTCCTTCTCCAGTTGAAGAAACACTTGGAATACCCAACACANTTGGAAATATGGAAAGACCGTTGGACAGAACTTTGCTCTATATCTTCTTCACAAGTCAANCTCACATGCAAGGACAACTTTGTCACTGAACTCACCATCATGGGTGATAAGANGCCAAACAAGGGTAGCAGAGATTTTGGTGGTTCTTTTGCAATTCCAAATCAAAAAACACTCTCACAAAGCTTCTCCATGGACTCTTTTGTGGCCACTCTAGCAAGGTTAACTAGCCTGAGAGTTCTTCGCCTTGTCTCTTTGGGCATTTGGGGACCACTCCCTGATAGAATTCACAGACTCTTTGCACTTGAACACTTGGACTTGAGTTCAAACTATCTNTATGGATCAATCCCTCCAAAGATTTCCACAATGGTGAACCTTCAAAGTCTTAGATTGGGTGACAACTTCTTCAATGGTACCANCCCAAGTTTGTTCAATTCATCAAGTAATCTCACAGTTCTTANTTTGAAGAATAACAGGTTGGAGGGTCCATTCCCACCTTCAATCCTTAGCATCACTACCTTGACTTACATTGACATGTCAAGCAATCAAATATCAGGGAGGTTGCAAGATTTCACTGGTTTGAGTAGCTTGGAAGAGCTAGATTTAAGGGAGAACAGATTAGACTCTTCACTACCCTCAATGCCCAAAGGGTTGATAANGCTTTCCCTCAGCAAAAACTCCTTCTCAGGTCAAATTCCAAAACACTATGGTCAACTAAATAGTCTTCAGCAGCTTGATGTTTCCTTCAATTCACTCACAGGAACTGCTCCCGCTGAGATTTTCTCTTTGCCCAACATCAGTTACTTGAATTTGGCTTCCAACATGTTAACTGGGCCACTCCAAAATNACCTTATATGTAGCCACAATCTCAGGTTTGTTGACATATCAAACAACAGGTTAATGGGGGCATTGCCTTCTTCACTTAGCAATGAATCAGAGAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCATCTGGGAGTGTTGTGAAGCATCAGCATGCAGTGTCCTACTGCACTGAGGCTCATGGGAAGAGGAAATCATACCAAGTTGGGATTTTTGTTGGTGTCATTGTGGGAATTCTAGTGATCATTGTGGTTTTGGCTTTNTGCATTGTTGTCACTTGTAAAAAGTATTACACTCGGGGGATGTCAGAGCAGCACCTATTGCGCAAAACAGCAGCAGGGTTCTCCTCTGAGCTTGTTACAAATGCAAGGTATGTTTCTGAAGCTGCAAAGTTAGGCAGAGAAGACCTCCCCACGTGTCGAGGAAAACTGGAGAGTGGGATACCGNTTGTTATAAGGTGCTTACCTCTGTCAAAAAAGTATTCAATTCGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGCCACCCNCATTTGGTATCCCTCCTGGGGCACTGCATTGATGGTATTATTGTAGGAGAGCATCATGACCCAAAGGTCTATCTCATTTATGAGTGTGTGTCAAATGGGAGAGATAGTTCTGGCAAGGTTTTCAATTGGTCAGAGAGATTGTCAGTTCTAATCAGTATTGCTAAGGCTGTCCACTTCCTACACATTGGAATGATACCTGGTTTCTTCAAAAATAGACTCAAGACCAACAATATTCTGCTTAATGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATCTCAGAAGAAACTGACACAAGTGGGGTGAATGGAGAAAGCCCTAATTCATGGCAAATGAAGAGTTTAGAGGATGATGTTTATAGCTTTGGATTCATATTACTTGAGGCACTTGTGGGACCTTCAATATCTGCTAAAAGAGAAGCAGTTGTGCTAAATGCAATGGCATCCTACAACAGTCAGGATGGGTGGAAACAAGTGGTGGACCCAGTTGTGCAAGCTACTTGCTCTAAANAATCACTGTTTGTTGTGATTTCCATAACAAACAAGTGCATTTCTCCCGAGTCCTGCAGCCGACCATCCATCGAGGATGTTCTTTGGAACTTGCAGTATGCTTCTCAAGTCCAGGCAACAGCTGAAGGGGATCAGAGAATTTGATTGATACTCCCACTACATCAGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00361	153200	157259	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000361s00013175.1	PF00560.28	LRR_1	148	165	0.44
Glyur000361s00013175.1	PF00560.28	LRR_1	242	259	0.9
Glyur000361s00013175.1	PF13855.1	LRR_8	264	322	6.20E-07
Glyur000361s00013175.1	PF00560.28	LRR_1	335	356	1.1
Glyur000361s00013175.1	PF00069.20	Pkinase	497	708	6.20E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.329
SRR1783600	control	0.413
SRR1783602	moderate drought stress	0.432
SRR1811619	moderate drought stress	0.428

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.592
DRR006520	Root Summer glycyrrhizin high producing strain	0.597
DRR006521	Root Winter glycyrrhizin high producing strain	0.202
DRR006522	Root Winter glycyrrhizin high producing strain	0.145
DRR006523	Root Summer glycyrrhizin low producing strain	0.610
DRR006524	Root Summer glycyrrhizin low producing strain	0.698
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.522
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.374

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.934
SRR2868004	Drought Stress (root)	0.342
SRR2967015	Control (root)	1.174

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.208
SRR9715740	Leaf	1.359
SRR9715741	Leaf	3.941
SRR9715739	Root	0.137
SRR9715742	Root	0.971
SRR9715743	Root	0.669

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.998
SRR8749028	MeJA induced 9h	26.943
SRR8749029	MeJA induced 9h	3.690
SRR8749030	Uninduced	6.993
SRR8749031	Uninduced	1.223
SRR8749032	Uninduced	4.559

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.860
SRR8400027	Control - Root	1.899