Gene detail

Gene detail information of Glyur000361s00013162

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G50400.1	0	purple acid phosphatase 27
NR	NP_001276313.1	0	probable inactive purple acid phosphatase 27-like precursor [Glycine max]
COG	YP_003093614.1	2.00E-17	metallophosphoesterase [Pedobacter heparinus DSM 2366]
Swissprot	tr\|Q5MAU8\|PPA27_ARATH	0	Probable inactive purple acid phosphatase 27 (Precursor)
trEMBL	tr\|M5WZ64\|M5WZ64_PRUPE	0	Purple acid phosphatase {ECO:0000256\|RuleBase:RU361203}

Sequence

Transcript Sequence

>Glyur000361s00013162.1
GTAGTTATGAAAATCACGAGTCTCACTCAGTCACTCGGAGACACAGAAACAGAATAATATATCAAAATGGAAGGGAGTGCTGGTAATTGCTTNAGGCTAAGTATGATATTGCTGATATTGTGGTTCACCAACTTGTGCAATATCGCTTTTGCTCATAGTGATCACATGCAAGGATATGGAGAGCAGCCACTGTCAAAGATTGCCATTCACAAGACCGTTCTTGCACTTCACAGTTCTGCCTCCATTACAGCATCCCCCTTTGTGTTGGGCAATAAGGGCGACGATACGGAATGGGTGACTGTAGAACTAGAGTTCCCAGAACCATCTATTGATGACTGGGTGGGAGTTTTTTCACCGGCAAACTTCAATTCATCAATATGTCCACCCATCCCCGGAGGCATTGGCTGGGTAGAGACACCATATATATGCACAGCCCCAATAAAGTACAAGTATGCCAACCACTCCAATGCAAACTATACAAAGACTGGGAAAACTACTTTGAAGTTCCAGTTGATCAATCAACGTGCAGATTTCTCCTTTGCACTNTTTTCAGGTGGATTATCAGNTCCTAAACTTGTGGCAGTTTCCAACTACATTTCATTTGCAAATCCTAAAGCACCTGTGTATCCACGCCTTGCTCAAGGGAAGTCTTGGAATGAAATGACAGTTACCTGGACAAGTGGATATGACATAAATGAAGCTGTACCGTTTGTTGAATGGGGTCTTATCGGGGGANAGCAGACACGATCACCTGCTGGAACATTGACATTTAATCGTAACAGCATGTGTGGTGAACCTGCACGAACTGTTGGCTGGCGCGACCCTGGTTTTATACACACAAGTTTCCTCAAAGAACTGTGGCCAAATATGAGGTACACTTATCGGTTGGGGCATATTTTGTCTGATGGTTCTCACGTCTGGAGTAAGAAGTATTCATTCAAGGCATCCCCATATCCTGGACAGAACTCATTGCAACGTGTTATCATATTTGGTGACATGGGAAAGGCTGAGCGTGATGGTTCAAATGACTATGCTGATTATCAACCTGGTTCACTTAACACCACAGACCAGCTCATCAAGGATTTACACAATATTGACATTGTTTTCCACATCGGAGATGTGTCATATGCAGATGGATACATCTCACAGTGGGACCAATTCACAGCTCAAGTGCAACAAATTTCGTCAACAGTCCCATACATGATTGCAAGTGGAAATCATGAACGTGATTGGCCAAACACAGGATCCTTTTACGACAATCCGAATTCAGGTGGGGAATGTGGAGTTCCTGCAGAAACCATGTACTATGTTCCTGCTGAGAACAGAGCCAAGTATGCAACAGATTATGGCATGTTTCGTTTCTGCATAGCAGATAGTGAGCATGACTGGAGAGAGGGATCAGAACAGTACAAATTCATTGAGCATTGCCTTGCAACAGTAGATAGAAAGCATCAACCATGGTTAATCTTTTCGGCTCATCGTCCCCTTGGATACTCCTCTAGTGTTCGGTATGAGATGGAGGGCTCATTTGGAGAGCCCATGGGAAGGGAAAGCTTGCAGGGGCTTTGGCAGAAGTACAAAGTAGACATTGCATTTTATGCCCACGACCATCACTACGAAAGAGTATGCCCCATTTATCAGTTCAAGTATGCAAACCACTCCAATGCAAACTACACAAAGACCGGGAAAACTACTTTGAAATTCCAGTTGATCAATCAACGTGCAGATTTCTCCTTTGCACTATTTTCAGGTGGATTATCAGATCCTAAACTCGTGGCAGTTTCCAACTACATTTCATTTGCAAATCCTAAAGCACCTGTGTATCCACGCCTTGCTCATGGGAACATGTGTGGTGAACCTGCACGAACTGTTGGCTGGCGCGACCCTGGTTTTATACACACAAGTTTCCTCAAAGAACTGTGGCCAAATATGAGGTACACTTATCGGTTGGGGCATATTTTGTCTGATGGTTCTCACGTCTGGAGTAAGAAGTATTCATTCAAGGCATCCCCATATCCTGGACAGAACTCATTGCAACGTGTTATCATATTTGGTGACTTGGGAAAGGCTGAGCGTGATGGTTCAAATCACTATTCTGATTATCAACCTGGTTCACTTAACACCACAGACCAGCTCATCAAGGATTTACACAATATTGACATTGTTTTCCACATCGGAGATGTGTCATATGCAGATGGATACATCTCACAGTGGGACCAATTCACAGCTCAAGTGCAACAAATTTCGTCAACAGTCCCATACATGATTGCAAGTGGAAATCATGAACGTGATTGGCCAAACACAGGATCCTTTTACGGCAAACCGAATTCAGGTGGGGAATGTGGAGTTCNTGCAGAAACCATGTACTATGTTCCTGCTGAGAACAGAGCCAAGTATGCAACAGATTATGGCATGTTTCGTTTCTGCATAGCAGATAGTGAGCATGACTGGAGAGAGGGATCAGAACAGTACAAATTCATTGAGCATTGCCTTGCAACAGTAGATAGAAAGCATCAACCATGGTTAATCTTTTCGGCTCATCGTCCCTTGGATACTCCTCTAGTGTTCGGGCTCATTTGGAGAGCCCATGGGAAGGGAAAGCTTGCAGGGCTTTGGCAGAAGTACAAAGTAGACATTGCATTTTATGCCCACGACCATCACTACGAAAGAGTATGCCCCATTTATCAGAATCAATGCGTGAATTCAGAAAAATCTCATTACTCTGGCACTGTGAATGGAACAATTCATGTTGTTGTGGGTGGAGGGGGACGTCTCTTGTATGACTTCACCGAAGTACCTCCAGTTTGGAGTATTTACAGGGACCGAGACTTTGGGTTTGGCAAGCTGACAGCATTCAATCACTCATATCTCCTGTTTGAGTACACGAAAAGTAGTGACGGAAAGGTCTACGACTCTTTTACCATTTCAAGGGACTATAGAGATGTCTTGGCCTGTGTGCACGATGGTTGTGAGAAAACCACCTTGGCAACCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00361	51692	83367	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003993 acid phosphatase activity

GO:0016787 hydrolase activity

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000361s00013162.1	PF00149.23	Metallophos	319	517	8.70E-16
Glyur000361s00013162.1	PF00149.23	Metallophos	682	866	2.60E-13
Glyur000361s00013162.1	PF14008.1	Metallophos_C	891	951	1.50E-17
Glyur000361s00013162.2	PF00149.23	Metallophos	328	512	1.20E-13
Glyur000361s00013162.2	PF14008.1	Metallophos_C	537	597	8.10E-18
Glyur000361s00013162.3	PF00149.23	Metallophos	328	512	1.20E-13
Glyur000361s00013162.3	PF14008.1	Metallophos_C	537	597	8.10E-18
Glyur000361s00013162.4	PF00149.23	Metallophos	305	489	1.10E-13
Glyur000361s00013162.4	PF14008.1	Metallophos_C	514	574	7.70E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	45.569
SRR1783600	control	44.597
SRR1783602	moderate drought stress	17.202
SRR1811619	moderate drought stress	17.065

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	39.431
DRR006520	Root Summer glycyrrhizin high producing strain	37.551
DRR006521	Root Winter glycyrrhizin high producing strain	0.447
DRR006522	Root Winter glycyrrhizin high producing strain	0.460
DRR006523	Root Summer glycyrrhizin low producing strain	5.701
DRR006524	Root Summer glycyrrhizin low producing strain	5.492
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.017
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.142

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.101
SRR2868004	Drought Stress (root)	16.145
SRR2967015	Control (root)	21.892

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	303.466
SRR9715740	Leaf	13.118
SRR9715741	Leaf	75.918
SRR9715739	Root	5.589
SRR9715742	Root	40.256
SRR9715743	Root	31.818

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.763
SRR8749028	MeJA induced 9h	2.550
SRR8749029	MeJA induced 9h	1.098
SRR8749030	Uninduced	9.503
SRR8749031	Uninduced	6.068
SRR8749032	Uninduced	2.163

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	50.171
SRR8400027	Control - Root	33.131