Gene detail

Gene detail information of Glyur000360s00014618

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G63640.1	P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
NR	XP_004503714.1	PREDICTED: kinesin-4-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q8W1Y3\|KP1_ARATH	Kinesin KP1
trEMBL	tr\|I1K6I4\|I1K6I4_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000360s00014618.1
ATTCGTCCCAACCTTTACTATTTTTTTTTCCAGGTCCCCAACGCAATTTATCGTTTGAAAACAACAACAACATAACAAACAAAGGAGGAAAAACGCAAACGCAAGGGGGTGCCATGCCCATTGTTGCTCATCNGCTCAACCTTCCTTCCACACACTCTCAAATCTCCCACCTAAATTCCCTTCTCCCTTCCCCTTAGACCCAAAAATCTGACAAAAATCTCCTTCAATTCGTTTCGATCCGTAACCCAACCGCGTTGTTCCATTGGCGTTGCAATTTCGAACATCCACATCTTCTTCCGTTTCTNATTGGTTGAATAATTTGATCTCTCCTCCCTCACCTCCTTCCTACATTGCTTCCCCAAGGCACGGTTAATCAAAGGGGAAAAGAGTAACAAAAACGAGCATGCAGTGGGAACAGGAGGGAGGGGGAAAAGGGGGAACTGACAACTTAAATGTGTTTCCTCGGGGAAGTGTGAACCAAAGAGAAGCTTTTGGAGGCATAATTGAAGGGAGCCGGCTTGCGTCTCTGGTGAAGTGGATAAATGTTGTGCTTCCTAACTTTAATCTGCCTTTAGAAACTTCAGAGGAGGAATTCAGGGCATGCTTGAGGGATGGATCGGTATTATGCAGCATTTTGGACAAGCTGGTTCCGGGTTCACTGGAGGGAGGAGCTGGTTCTTTGAATGAGCCAGTGGATGTTAAAAGGTTTCTGGTGGCCTTGGATGAATTGGGGTTGTCAGGATTTGAATTGTCAGACCTGGAGCAGGGATCCATGGTGCCTGTGTTGCATTGCCTTGAGACCCTGAAAACTCATTTTGCTTATAATGCTACGCGAGAGAATCTCCAAAGTTGTTATAGAAAGAGGTGGGACCAGCCAGATCTAACCCTAGCAGAAACTGATGGTTGCCTCAAGGATGCTTCAAAATTCCAACGTGCTGTTGATGGTTCTGCTGTATCAGATGGAATTTCTTCCATAGATCATATTGGATTAAAGTCTAATGAACTGTCCCAGTTGAAGCGAGGATTGCATGTGGATCTTTCAGATGCTAAACTTAATGAATTATTTAAATCAAACAATTTGGATACTGTCTCAACACGATTGCTTTTTAACATAGGAAATAGGATCCTAAGTGATATCTTTGAAAAGAAGAATGGAGAGGTACCTCAAGCTCAGCGTGCAACATGCCTGTTGAGGAAAATTCTGCAAGTAATTGAGTTACGCTTTTCAAATCAAGCTGAAAGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTATCAAACAAAATTAAATGCACTTGAAACGCTGGCGGTAGGGACAGCCGAAGAGAATGAGGTTGTGACAAGTTGGGTTCAGCAGTTGAAGTTTGCTTTGCACCATGAACAAACTAAATTTGAGGAGAAGAAGAAACTTGAAGAGCAGGATTTTTCTCGACTAAAGAAAGACAAAGTTCGCAGTGAAATCGAAATTTCTGCATTGAAGCAAGATTTGGAAATGGCCAACAGAATACATGAAGAACATGTTTCGGAGTTAGAATTGCAAGCTGCTGAGTCTAAAGCTGAATATGANAAAAGGATAGAGGAACTTAAGCGTCATTTGGCTGATGCGAGGAAGCAAATAAAGGAACTGGAGGCATTTTCAGAATCCAGATCATTGAATTGGAAGAATAAAGAGCATACCTATCAAAATTTTGTAAATCACCAATTTGGAGCCTTCCAGGAATTGAGAACTTCCATGAAGTCTATCAAAGATGAAGTGAAAAAAACAAAAAGAAGCTACCTAGAGGAATTCAAGTACTTTGGAATCAAGCTCAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTACTTCTAACAGAAAATAGGAAATTATATAATGAAGTTCAAGATTTGAAAGGAAATATCAGGGTATATTGTCGGATTAGACCATTTCTTTCGGGGCAAAGTCAAAGCCATACAACAATTGAGTTTATTGGTGATGATGGAGAACTAATTGTCAGCAATCCTCTTAAACAAGGAAAAGAAAGCCGCAAGCTTTTTAAATTTAATAAGGTTTTTGCTCAAGCAGCAAGTCAAGAGGAAGTATTCATGGACACTCGACCGCTAATTCGTTCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACTTATACCATGAGTGGACCTAGTCTATCGTCAAAGTCAGATTGGGGAGTCAACTATCGGGCACTTCACGATCTTTTCCATATCTCCCAGACTAGGAGAAATTCTATTCTTTATGAAATTGGAGTTCAAATGGTTGAAATTTATAATGAGCAAGTTCGTGATTTGCTATCAAGCAACGGTCCTCAGAAGAGATATCCTTTTCCATTTTTATTCCCAGAGCCCACAATAGAAAAATATACGAAATTTTGTTTCTTTGACTTGCACACACTTGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTGAATTCTATGACAGATGTCCTTGAGTTGATGAATATTGGGATGATGAATCGGGCAACTAGTGCCACAGCCTTAAATGAAAGAAGTAGTAGATCACACAGTGTTCTCTCTATTCATGTTCGAGGAACGGAGTTGAAGACCAACGCTCTGTTGCGTGGATGTCTGCATCTTGTAGATCTTGCGGGAAGTGAAAGAGTAGATCGTTCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAGCATATAAACAAATCGCTATCTGCGCTTGGAGATGTGATATTTGCTCTAGCACAAAAGAGTTCACATGTACCATACAGAAATAGTAAATTGACTCAACTTCTTCAGAGTTCCTTAGGTGGTCAAGCAAAAACCCTTATGTTTGTACAGCTTAATCCTGATGTTGCTTCATATTCCGAAACTATAAGCACCTTGAAGTTTGCTGAGAGGGTTTCTGGTGTTGAGTTGGGTGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGGTGGCATCTCTCAAGGATGCAATGGCAAGGAAGGATGAAGAGATTGAGCGATTGCAATCGCACAAGGCTAATCACAATGGTGCAAAGCTTGGTACGATCTCACTAAGGTATGGGTCATCATCTCCAAGGAGACATTCCATAGGGACTCCCCGCCATAGCACGAGACTTTCAGGAACAAGGAGCTTAGGAGCCAATGAAAAAGCAGCTTCTGACGTGGATAACTGCTCAGAGTATAGTGATAAGCATTCGGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCCAGTTACCTACGATCGAAATTAGCTAGAGAAGATAGCAATGAAAATTTCAATGAGGACATTGAACTCTTAGGATTTGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGATGGCGGCCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGAACTAGAGAAGGCAGCTGAAACTACACCAGCTAAGGACACAACAGCCAACAACCTTCCAGCCGAGAGCACCGAAAAGTCCATTATGCCATCCAAAATTCCCAAAGCTCCGCAAGTCCAGCCAAAACTGCAGACAAAAACTTCTAGGCTATCATTGAACAGAAGCACCTCGAAGGTTTTGTCAAGTGTTAGAAAACCCACGGTCGGTAGCTCGTCTTCGGTGAAGCCCCTTAAACGATGGCAATAGTTAGGATGCCACTTGGGTGCTGTAGAGTGCTCATAGAGATAGCTTATAGGAACTTTTTATTCATGTTAGGGTGCTCATTCTATTATACTGTACTCAAGGCTCAAGGGCTATTTGCTTATTTCAGCTTCAATCTGTTATTGAACGAGGCGATTGCAAACTCTAGCTT

Protein Sequence

>Glyur000360s00014618.1
MQWEQEGGGKGGTDNLNVFPRGSVNQREAFGGIIEGSRLASLVKWINVVLPNFNLPLETSEEEFRACLRDGSVLCSILDKLVPGSLEGGAGSLNEPVDVKRFLVALDELGLSGFELSDLEQGSMVPVLHCLETLKTHFAYNATRENLQSCYRKRWDQPDLTLAETDGCLKDASKFQRAVDGSAVSDGISSIDHIGLKSNELSQLKRGLHVDLSDAKLNELFKSNNLDTVSTRLLFNIGNRILSDIFEKKNGEVPQAQRATCLLRKILQVIELRFSNQAESMKNQNNLFKAREGKYQTKLNALETLAVGTAEENEVVTSWVQQLKFALHHEQTKFEEKKKLEEQDFSRLKKDKVRSEIEISALKQDLEMANRIHEEHVSELELQAAESKAEYXKRIEELKRHLADARKQIKELEAFSESRSLNWKNKEHTYQNFVNHQFGAFQELRTSMKSIKDEVKKTKRSYLEEFKYFGIKLKGLAEAAENYHVLLTENRKLYNEVQDLKGNIRVYCRIRPFLSGQSQSHTTIEFIGDDGELIVSNPLKQGKESRKLFKFNKVFAQAASQEEVFMDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQTRRNSILYEIGVQMVEIYNEQVRDLLSSNGPQKRYPFPFLFPEPTIEKYTKFCFFDLHTLGIWNTAQPNGLAVPDASMHSVNSMTDVLELMNIGMMNRATSATALNERSSRSHSVLSIHVRGTELKTNALLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQVASLKDAMARKDEEIERLQSHKANHNGAKLGTISLRYGSSSPRRHSIGTPRHSTRLSGTRSLGANEKAASDVDNCSEYSDKHSEAGSHQSMDDFRNKSSYLRSKLAREDSNENFNEDIELLGFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPELEKAAETTPAKDTTANNLPAESTEKSIMPSKIPKAPQVQPKLQTKTSRLSLNRSTSKVLSSVRKPTVGSSSSVKPLKRWQ

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00360	69940	78479	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000360s00014618.1	PF00307.26	CH	41	138	1.00E-05
Glyur000360s00014618.1	PF00225.18	Kinesin	509	854	2.40E-101

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.442
SRR1783600	control	7.454
SRR1783602	moderate drought stress	5.523
SRR1811619	moderate drought stress	5.437

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.845
DRR006520	Root Summer glycyrrhizin high producing strain	6.859
DRR006521	Root Winter glycyrrhizin high producing strain	2.691
DRR006522	Root Winter glycyrrhizin high producing strain	2.538
DRR006523	Root Summer glycyrrhizin low producing strain	5.052
DRR006524	Root Summer glycyrrhizin low producing strain	5.005
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.328
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.235

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.420
SRR2868004	Drought Stress (root)	14.538
SRR2967015	Control (root)	15.683

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.371
SRR9715740	Leaf	4.927
SRR9715741	Leaf	5.804
SRR9715739	Root	0.790
SRR9715742	Root	4.753
SRR9715743	Root	3.476

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.958
SRR8749028	MeJA induced 9h	12.093
SRR8749029	MeJA induced 9h	10.006
SRR8749030	Uninduced	7.647
SRR8749031	Uninduced	10.828
SRR8749032	Uninduced	6.160

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	20.176
SRR8400027	Control - Root	20.245