Gene detail

Gene detail information of Glyur000360s00014609

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G63660.1	GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative
NR	XP_004503710.1	PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Cicer arietinum]
COG	YP_001526621.1	GMP synthase [Azorhizobium caulinodans ORS 571]
trEMBL	tr\|A0A072TW15\|A0A072TW15_MEDTR	GMP synthase [glutamine-hydrolyzing] protein {ECO:0000313\|EMBL:KEH21068.1}

Sequence

Transcript Sequence

>Glyur000360s00014609.1
CAGATTGTCATTTAGTAGTACCACTTTTAGTTTAAAAATTTAAACGTTCACATTTGCATAAACCCTGGCCTGTTACTGTGTGGAATTTTAAGAGCGGCATAAACCCTAGCCGAACTAGGAGGTTGTAGCAGCAGCCGCCGCCAGAGTCAGCCATCACCACCACCACCACCACCACCACTCACATCACTTCACGATGGACGCAAAACGCGTGAAATCAGACCTTGTTCTCATCCTAGACTTCGGTTCCCAATACACTCACCTCATCACTCGCCGCATCCGCAGTCTCTCCGTGTTCTCCCTCTGCATTTCCGGCACCTCTTCCCTCAACTCCATCACCGAACTCAACCCCTCCGTCGTCATCCTCTCCGGCGGCCCCAACTCCGTCCACACCCCTGATTCCCCCTCCTTCCCCGACGGCTTCCTCCAATGGGCTCAGTCCAACGGCGTCCCCGTCCTCGGCATTTGCTACGGCCTCCAGCTCCTCGTCCACCGCCTCGGCGGCGAGGTCCGCGTTGGCCATGAACAAGAGTACGGCCGCATGGAAATTCGCGTCGATAAACCCTCCGCCCTCTTTCCCTCCGACAAAGTCGGCCACAGCCAACTCGTCTGGATGAGCCACGGCGATGAAGCCGCCACGCTTCCCCCCGGTTTCCATGTTGTCGCGCGAAGCCAACAGGGCTCCGTTGCTGCCATAGAGAACCCCTCCACCAAGTTCTATGGACTACAGTATCACCCAGAGGTGACTCATACGCCCGAGGGAATGGAAACGCTGCGGCATTTTCTGCTTGATTTTTGTGGAGTTAAAGCCNGGTGGAGGATGGAGGATGTGTTGGAGGAAGAGGTCAAAGTGATCAAAGATAAGGTGGCTCCTGAGGACCATGTCATTTGTGCCTTGTCTGGTGGTGTTGATTCCGCTGTTGCTGCTACCATAGTTCATAAAGCCATTGGAGATAGGCTTCATTGTGTTTTCGTCGACAATGGCTTGCTCAGGTATAAGGAGAAGGAACGTGTGATGGAAACATTTGAAAAGGATNTTCATTTACCGGTTGTGTTTGTTGATGCTGCAAATCAATTTCTTACAAAGCTCAAAGGTGTAACGGATCCTGAGACGAAGAGGAAAATCATCGGGAAAGAGTTTATCTGCATCTTTGATGCTTTTGCTCAGGNGCTAGAACAGAAACTGGGAAGAAAACCTTCTTACTTGGTTCAGGGAACCTTGTACCCTGACGTGATTGAGTCCTGCCCACCACCTGGAAGTGGTAGAACCCATTCCCACACCATCAAGAGCCATCATAATGTTGGGGGTCTTCCAAAGGACATGAAATTGAAACTTATTGAACCACTTAAACTGCTATTCAAGGATGAGGTTCGTCAATTGGGGAGGATNATGGATGTTCCCGAGGCCTTTCTAAAACGCCATCCATTCCCTGGGCCTGGTCTTGCAGTGAGAGTTTTGGGCGACGTGACTGAAGGAAATGCCTTGGAAATTCTCCGACAGGTTGATGAGATTTTCATTCAGTCAATCAAGGATGCGGGCCTTTATGATACAATATGGCAAGCCTTTGCAGTTTTCTTGCCAATACGATCTGTTGGAGTTCAAGGTGATAAACGAACACACTCCCATGTTGTTGCTCTCAGAGCTGTTACTAGTCAAGATGGAATGACAGCAGACTGGTACTACTTTGAGCACAAGTTCCTCGATGATGTTTCACGCAAAATCTGTAATGGTGTCCGTGGTGTGAATCGCGTTGTACAAGACATNACATCAAAGCCTCCATCAACAATTGAATGGGAATAATATCACATTTAGTAGTTTTCACNTCACAAAAGCAGTGAGGTACTATAAAGTTGTATATGCGCTAAGGTACTGGCTATTTACTTGCTTTATTTTGTTGTGTTTCCATCCTGCTTAGGGCTTGGAGGGGAGGGAAGTGATTGGAGCGGGAATTTATAATGGGATTGTTATGATTCTTGAGATTGGAATAGCTATAATTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00360	37056	40010	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01951	guaA, GMPS	EC:6.3.5.2	Purine metabolism	map00230
			Drug metabolism - other enzymes	map00983

Gene Ontology

biological_process

GO:0006164 purine nucleotide biosynthetic process

GO:0006177 GMP biosynthetic process

molecular_function

GO:0003922 GMP synthase (glutamine-hydrolyzing) activity

GO:0005524 ATP binding

GO:0016462 pyrophosphatase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000360s00014609.1	PF00117.23	GATase	13	199	1.80E-33
Glyur000360s00014609.1	PF02540.12	NAD_synthase	213	255	8.00E-05
Glyur000360s00014609.1	PF00958.17	GMP_synt_C	442	533	3.50E-36

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	24.452
SRR1783600	control	24.348
SRR1783602	moderate drought stress	18.824
SRR1811619	moderate drought stress	19.071

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.211
DRR006520	Root Summer glycyrrhizin high producing strain	12.077
DRR006521	Root Winter glycyrrhizin high producing strain	1.951
DRR006522	Root Winter glycyrrhizin high producing strain	1.826
DRR006523	Root Summer glycyrrhizin low producing strain	16.011
DRR006524	Root Summer glycyrrhizin low producing strain	15.594
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.648
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.433

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	54.528
SRR2868004	Drought Stress (root)	39.631
SRR2967015	Control (root)	30.622

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.974
SRR9715740	Leaf	9.498
SRR9715741	Leaf	6.770
SRR9715739	Root	7.720
SRR9715742	Root	15.237
SRR9715743	Root	15.601

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	90.085
SRR8749028	MeJA induced 9h	41.793
SRR8749029	MeJA induced 9h	48.644
SRR8749030	Uninduced	2.626
SRR8749031	Uninduced	1.759
SRR8749032	Uninduced	3.648

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.229
SRR8400027	Control - Root	14.287