Gene detail information of Glyur000360s00014608 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45900.1 | 1.00E-07 | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related |
| NR | KHN16816.1 | 0 | hypothetical protein glysoja_002913 [Glycine soja] |
| trEMBL | tr|K7L4E8|K7L4E8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G01835.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00360 | 32047 | 35616 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000360s00014608.1 | PF12552.3 | DUF3741 | 108 | 132 | 4.50E-09 |
| Glyur000360s00014608.1 | PF14309.1 | DUF4378 | 516 | 663 | 2.40E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.156 |
| SRR1783600 | control | 6.400 |
| SRR1783602 | moderate drought stress | 8.038 |
| SRR1811619 | moderate drought stress | 8.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.718 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.683 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.909 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.964 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.657 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.308 |
| SRR2868004 | Drought Stress (root) | 7.004 |
| SRR2967015 | Control (root) | 8.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.905 |
| SRR9715740 | Leaf | 12.860 |
| SRR9715741 | Leaf | 15.092 |
| SRR9715739 | Root | 0.385 |
| SRR9715742 | Root | 0.158 |
| SRR9715743 | Root | 0.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.357 |
| SRR8749028 | MeJA induced 9h | 0.482 |
| SRR8749029 | MeJA induced 9h | 1.983 |
| SRR8749030 | Uninduced | 0.450 |
| SRR8749031 | Uninduced | 0.768 |
| SRR8749032 | Uninduced | 0.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.112 |
| SRR8400027 | Control - Root | 5.249 |