Gene detail information of Glyur000359s00016697 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05950.1 | 1.00E-24 | maternal effect embryo arrest 60 |
| NR | KEH30196.1 | 1.21E-88 | maternal effect embryo arrest protein [Medicago truncatula] |
| trEMBL | tr|A0A072ULB7|A0A072ULB7_MEDTR | 5.00E-89 | Maternal effect embryo arrest protein {ECO:0000313|EMBL:KEH30196.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00359 | 37115 | 37690 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.233 |
| SRR1783600 | control | 3.345 |
| SRR1783602 | moderate drought stress | 1.008 |
| SRR1811619 | moderate drought stress | 0.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.248 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.034 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.375 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.498 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.057 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.690 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.529 |
| SRR2868004 | Drought Stress (root) | 3.681 |
| SRR2967015 | Control (root) | 4.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.864 |
| SRR9715740 | Leaf | 0.548 |
| SRR9715741 | Leaf | 0.320 |
| SRR9715739 | Root | 2.384 |
| SRR9715742 | Root | 15.974 |
| SRR9715743 | Root | 12.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.662 |
| SRR8749028 | MeJA induced 9h | 15.291 |
| SRR8749029 | MeJA induced 9h | 25.509 |
| SRR8749030 | Uninduced | 0.670 |
| SRR8749031 | Uninduced | 6.823 |
| SRR8749032 | Uninduced | 10.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.766 |
| SRR8400027 | Control - Root | 4.622 |