Gene detail information of Glyur000358s00021171.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57300.3 | 2.00E-116 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | KHN38004.1 | 6.13E-180 | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Glycine soja] |
| COG | YP_005079013.1 | 2.00E-87 | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Pseudovibrio sp. FO-BEG1] |
| Swissprot | tr|Q5JNC0|COQ5_ORYSJ | 1.00E-145 | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (Precursor) |
| trEMBL | tr|I1KVG9|I1KVG9_SOYBN | 2.00E-180 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G22890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00358 | 130030 | 136276 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K06127 | COQ5 | EC:2.1.1.201 | Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
| Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000358s00021171.1 | PF01209.13 | Ubie_methyltran | 41 | 292 | 2.20E-80 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.457 |
| SRR1783600 | control | 15.831 |
| SRR1783602 | moderate drought stress | 22.007 |
| SRR1811619 | moderate drought stress | 21.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.070 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.342 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.847 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.967 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.893 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.977 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 46.368 |
| SRR2868004 | Drought Stress (root) | 56.429 |
| SRR2967015 | Control (root) | 57.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.349 |
| SRR9715740 | Leaf | 20.196 |
| SRR9715741 | Leaf | 28.738 |
| SRR9715739 | Root | 5.704 |
| SRR9715742 | Root | 14.063 |
| SRR9715743 | Root | 12.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.741 |
| SRR8749028 | MeJA induced 9h | 54.585 |
| SRR8749029 | MeJA induced 9h | 32.164 |
| SRR8749030 | Uninduced | 60.640 |
| SRR8749031 | Uninduced | 23.241 |
| SRR8749032 | Uninduced | 36.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 75.966 |
| SRR8400027 | Control - Root | 76.700 |