Gene detail information of Glyur000358s00021165 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15760.1 | 4.00E-42 | Sterile alpha motif (SAM) domain-containing protein |
| NR | XP_004506965.1 | 6.72E-91 | PREDICTED: uncharacterized protein LOC101500679 [Cicer arietinum] |
| trEMBL | tr|G7JGU4|G7JGU4_MEDTR | 9.00E-90 | SAM domain protein {ECO:0000313|EMBL:AES86537.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00358 | 40247 | 40873 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.285 |
| SRR1783600 | control | 2.580 |
| SRR1783602 | moderate drought stress | 2.911 |
| SRR1811619 | moderate drought stress | 3.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.339 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.173 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.308 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.174 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.487 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.939 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.753 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.973 |
| SRR2868004 | Drought Stress (root) | 14.090 |
| SRR2967015 | Control (root) | 13.443 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.421 |
| SRR9715740 | Leaf | 0.101 |
| SRR9715741 | Leaf | 0.940 |
| SRR9715739 | Root | 2.315 |
| SRR9715742 | Root | 2.011 |
| SRR9715743 | Root | 1.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.584 |
| SRR8749028 | MeJA induced 9h | 0.980 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.213 |
| SRR8749032 | Uninduced | 0.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.971 |
| SRR8400027 | Control - Root | 20.758 |