Gene detail information of Glyur000357s00018135 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28940.1 | 6.00E-103 | Phosphorylase superfamily protein |
| NR | XP_004292852.1 | 0 | PREDICTED: uncharacterized protein LOC101304070 [Fragaria vesca subsp. vesca] |
| COG | NP_421069.1 | 3.00E-33 | phosphorylase [Caulobacter crescentus CB15] |
| Swissprot | tr|Q07469|BSPA_POPDE | 1.00E-31 | Bark storage protein A (Precursor) |
| trEMBL | tr|I1KIN3|I1KIN3_SOYBN | 5.00E-169 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G09220.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00357 | 116791 | 123684 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000357s00018135.1 | PF01048.15 | PNP_UDP_1 | 40 | 319 | 2.40E-29 |
| Glyur000357s00018135.1 | PF01048.15 | PNP_UDP_1 | 347 | 614 | 3.70E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.423 |
| SRR1783600 | control | 19.914 |
| SRR1783602 | moderate drought stress | 20.847 |
| SRR1811619 | moderate drought stress | 21.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.308 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.083 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.085 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.034 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.565 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.716 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.822 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 70.572 |
| SRR2868004 | Drought Stress (root) | 63.191 |
| SRR2967015 | Control (root) | 70.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 59.418 |
| SRR9715740 | Leaf | 65.211 |
| SRR9715741 | Leaf | 39.300 |
| SRR9715739 | Root | 15.540 |
| SRR9715742 | Root | 9.160 |
| SRR9715743 | Root | 10.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.382 |
| SRR8749028 | MeJA induced 9h | 8.325 |
| SRR8749029 | MeJA induced 9h | 6.098 |
| SRR8749030 | Uninduced | 14.132 |
| SRR8749031 | Uninduced | 28.817 |
| SRR8749032 | Uninduced | 12.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.118 |
| SRR8400027 | Control - Root | 30.304 |