Gene detail information of Glyur000357s00018133 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28950.1 | 2.00E-103 | RHO-related protein from plants 9 |
| NR | XP_007152858.1 | 2.07E-137 | hypothetical protein PHAVU_004G166000g [Phaseolus vulgaris] |
| COG | YP_004430219.1 | 3.00E-14 | small GTP-binding protein [Krokinobacter sp. 4H-3-7-5] |
| Swissprot | tr|O82480|RAC7_ARATH | 3.00E-131 | Rac-like GTP-binding protein ARAC7 |
| trEMBL | tr|V7C3W1|V7C3W1_PHAVU | 8.00E-138 | Uncharacterized protein {ECO:0000313|EMBL:ESW24852.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00357 | 103408 | 105763 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000357s00018133.1 | PF00071.17 | Ras | 10 | 180 | 1.70E-52 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.240 |
| SRR1783600 | control | 5.495 |
| SRR1783602 | moderate drought stress | 2.738 |
| SRR1811619 | moderate drought stress | 2.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.878 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.354 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.071 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.171 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.729 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.065 |
| SRR2868004 | Drought Stress (root) | 9.758 |
| SRR2967015 | Control (root) | 11.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.590 |
| SRR9715740 | Leaf | 0.138 |
| SRR9715741 | Leaf | 1.088 |
| SRR9715739 | Root | 9.459 |
| SRR9715742 | Root | 4.407 |
| SRR9715743 | Root | 3.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.387 |
| SRR8749028 | MeJA induced 9h | 10.362 |
| SRR8749029 | MeJA induced 9h | 10.269 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.101 |
| SRR8749032 | Uninduced | 0.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.034 |
| SRR8400027 | Control - Root | 25.326 |