Gene detail

Gene detail information of Glyur000357s00018130

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67300.1	0	Major facilitator superfamily protein
NR	XP_007152856.1	0	hypothetical protein PHAVU_004G165800g [Phaseolus vulgaris]
COG	YP_001524171.1	3.00E-67	sugar transporter [Azorhizobium caulinodans ORS 571]
Swissprot	tr\|Q9FYG3\|PLST2_ARATH	0	Probable plastidic glucose transporter 2
trEMBL	tr\|V7C6D1\|V7C6D1_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW24850.1}

Sequence

Transcript Sequence

>Glyur000357s00018130.1
GTTCTTTTATATAATGTTGTTCTCGCTCGTGTTCCTTTCTTTTCCCCGCTAACAAACCAACAACTGGTACTGATTGTANCGCACTCCTTCTTTCTTTTTTTCTGTTTCCTTCGCAAATCAGCAACTCCCCGGCGCACGATAGCTTCATCGCTTTCGTTACGCGGGCAGCACCACCGTTTATTATTTCGTTCCCGAACAAACCCTCTCTGAGATTTTTCTCTGCTCTCTCTGTTTCTCTCTCTGTCTCTCTGAACCAAACAGAGGATCTGTCATCTGAGCCAAACACANAGAATCAAAGAGAGAGCTCTGTGAATATCGGAGCTCTCTGTTGATTGGTCAAATATTGGCATGTGGCGTGAAACTTCCTCTATGTACAAACGCACTCCTTCAAGAGATTATTCAAATATGGAAGACGTGGAAGAAAACTCAGATCTTTTAGACAACTACTTGGATAAGGAAGCCTCAAATCCTTCCTGGAAGCTGTCTTTACCGCATGTACTTGTGGCAACCATTTCTTCATTCCTATTTGGATACCATCTTGGAGTAGTTAATGAACCACTTGAGAGCATTTCTGTGGATCTTGGGTTCAACGGAAATACCTTAGCAGAAGGTCTGGTGGTGAGCACATGTCTTGGTGGTGCCTTGATTGGATGTCTACTGAGCGGTTGGATTGCTGATGGGGTGGGGCGTCGTAGGGCTTTCCAGTTGTGTGCTTTGCCAATGATAATTGGTGCTTCAATGAGTGCAGCTACAAACAACTTGTTTGGCATGCTTGTAGGAAGGTTATTTGTTGGGACTGGGCTGGGCCTGGGCCCTGCTGTTGCCTCTCTGTATGTGACAGAGGTTTCCCCCTCTTTTGTGCGGGGTACCTATGGGGCCTTCATCCAGATTGCAACATGCCTTGGTCTAATGGGATCTTTATTGATTGGAATCCCTGTCAAAGAAATTTCTGGATGGTGGCGAGTTTGTTTCTGGGTGTCTATCATTCCTGCTGCTATACTTGCTCTGGCTATGGTCTTCTGTGCAGAGAGTCCGCATTGGTTATACAAGCAAGGAAGGACTGCTGAAGCAGAAGCCGAGTTTGAAAGGCTTCTGGGTGTATCTGAAGCAAAACTTGCAATATCACAGTTATCCAAGGTAGATAGAGGAGATGATACTGATACTGTGAAACTCTCAGAATTGCTTCATGGTCGTCATTCTAAAGTTGTTTTTATTGGATCAACCCTGTTTGCTTTACAACAGCTATCTGGTATAAATGCTGTGTTTTATTTCTCTTCAACTGTTTTTAAAAGTGCTGGAGTGCAACCGGGCTTTGCAAACGCCTGCGTAGGAATTGCTAATTTGGCAGGATCTATCGTTTCGATGGTTTTGATGGATAAGCTTGGAAGAAAGGTTCTACTCTTCTGGAGTTTCTTCGGCATGGCAATAGCAATGATCATTCAAGCCACAGGAGCAAGTTCACTTGTATCAAGCCTGGGAGGTCCGTACGTATCTATTGGTGGCATGCTTCTGTTTGTCTTGACATTTGCTCTTGGGGCTGGCCCAGTTCCAGGTCTCCTTCTACCAGAAATNTTTCCTGGTCGAATCAGAGCCAAAGCCATGGCAATCTGTATGTCCGTGCATTGGGTCATAAATTTCTTTGTTGGATTACTGTTCTTGCGCTTGCTGGAGAAACTTGGTCCACAGCTGCTTTACTCTATGTTTGCTACATTTTGCATCATGGCAGTAATTTTTGTGAAAAGAAATGTGGTTGAAACCAAAGGGAAGTCACTTCATGAAATTGAGATCGCACTTCTTCCCCAGGACTAGAGCTTCTTTCTTTTATGAAGCTATACTCGTCGCAGTAAATTTGCATAGAGCTTGGGCTATCATAGTTTCAACTACGAGCAGGTTGCGTTTCATCACAAGGAGAAGCTCAAGGAAGGAACTATGCATTGTTTTAGTGTAAGTTGTAACATTAGTACGAAGAGGCTTTTAGTGTATTGAGATAGCACGTTGTGATGGAGTGGATGTACCTTTGCGGCTTACAACACTATTCTAACATCTCCTGTTTGGGCTCGTTGAAGGAAAAGGAATGGGGGAAACCTATGTATCCAATAATATTGAGATAACGTCCTGTATGTGATGTAATATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00357	84112	91496	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0005215 transporter activity

GO:0022857 transmembrane transporter activity

GO:0022891 substrate-specific transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000357s00018130.1	PF00083.19	Sugar_tr	51	480	1.10E-90

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.764
SRR1783600	control	17.668
SRR1783602	moderate drought stress	21.984
SRR1811619	moderate drought stress	22.053

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	37.392
DRR006520	Root Summer glycyrrhizin high producing strain	36.434
DRR006521	Root Winter glycyrrhizin high producing strain	52.070
DRR006522	Root Winter glycyrrhizin high producing strain	50.526
DRR006523	Root Summer glycyrrhizin low producing strain	35.837
DRR006524	Root Summer glycyrrhizin low producing strain	36.291
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.510
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.327

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	41.030
SRR2868004	Drought Stress (root)	30.903
SRR2967015	Control (root)	30.168

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.906
SRR9715740	Leaf	22.772
SRR9715741	Leaf	25.742
SRR9715739	Root	31.907
SRR9715742	Root	49.640
SRR9715743	Root	49.161

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.468
SRR8749028	MeJA induced 9h	20.049
SRR8749029	MeJA induced 9h	17.409
SRR8749030	Uninduced	13.035
SRR8749031	Uninduced	9.627
SRR8749032	Uninduced	15.815

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	61.594
SRR8400027	Control - Root	46.203