Gene detail information of Glyur000357s00018127 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24600.1 | 2.00E-36 | Late embryogenesis abundant protein, group 2 |
| NR | XP_004513002.1 | 7.51E-136 | PREDICTED: uncharacterized protein LOC101500301 [Cicer arietinum] |
| trEMBL | tr|M5VR79|M5VR79_PRUPE | 5.00E-134 | Uncharacterized protein {ECO:0000313|EMBL:EMJ03481.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00357 | 70780 | 73603 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.632 |
| SRR1783600 | control | 9.597 |
| SRR1783602 | moderate drought stress | 7.525 |
| SRR1811619 | moderate drought stress | 7.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.684 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.092 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.965 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.757 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.428 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.471 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.551 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.181 |
| SRR2868004 | Drought Stress (root) | 3.632 |
| SRR2967015 | Control (root) | 4.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.529 |
| SRR9715740 | Leaf | 5.189 |
| SRR9715741 | Leaf | 4.431 |
| SRR9715739 | Root | 5.581 |
| SRR9715742 | Root | 5.163 |
| SRR9715743 | Root | 5.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.178 |
| SRR8749028 | MeJA induced 9h | 4.599 |
| SRR8749029 | MeJA induced 9h | 1.494 |
| SRR8749030 | Uninduced | 1.285 |
| SRR8749031 | Uninduced | 0.328 |
| SRR8749032 | Uninduced | 0.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.504 |
| SRR8400027 | Control - Root | 6.385 |