Gene detail information of Glyur000357s00018121 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46225.2 | 3.00E-18 | ABI-1-like 1 |
| NR | XP_007152847.1 | 4.40E-145 | hypothetical protein PHAVU_004G164900g [Phaseolus vulgaris] |
| Swissprot | tr|Q5JMF2|ABIL5_ORYSJ | 4.00E-33 | Probable protein ABIL5 |
| trEMBL | tr|V7C7F3|V7C7F3_PHAVU | 2.00E-145 | Uncharacterized protein {ECO:0000313|EMBL:ESW24841.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00357 | 38436 | 42217 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.634 |
| SRR1783600 | control | 6.683 |
| SRR1783602 | moderate drought stress | 9.478 |
| SRR1811619 | moderate drought stress | 9.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.424 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.320 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.008 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.979 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.270 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.508 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.864 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.575 |
| SRR2868004 | Drought Stress (root) | 1.784 |
| SRR2967015 | Control (root) | 1.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.510 |
| SRR9715740 | Leaf | 14.604 |
| SRR9715741 | Leaf | 13.647 |
| SRR9715739 | Root | 0.447 |
| SRR9715742 | Root | 3.303 |
| SRR9715743 | Root | 2.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.074 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.590 |
| SRR8400027 | Control - Root | 12.952 |