Gene detail information of Glyur000355s00013948 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01750.1 | 9.00E-158 | Ankyrin repeat family protein |
| NR | KHN34799.1 | 0 | Ankyrin repeat-containing protein [Glycine soja] |
| COG | YP_004671803.1 | 2.00E-16 | hypothetical protein SNE_A14350 [Simkania negevensis Z] |
| Swissprot | tr|Q6AWW5|Y5262_ARATH | 1.00E-14 | Ankyrin repeat-containing protein At5g02620 |
| trEMBL | tr|I1K3J5|I1K3J5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G27760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00355 | 138151 | 141664 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000355s00013948.1 | PF12796.2 | Ank_2 | 197 | 281 | 1.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.208 |
| SRR1783600 | control | 10.281 |
| SRR1783602 | moderate drought stress | 28.729 |
| SRR1811619 | moderate drought stress | 28.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 58.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 58.171 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 168.543 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 163.729 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 86.984 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 87.085 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 53.559 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.469 |
| SRR2868004 | Drought Stress (root) | 17.982 |
| SRR2967015 | Control (root) | 27.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 58.018 |
| SRR9715740 | Leaf | 100.513 |
| SRR9715741 | Leaf | 66.567 |
| SRR9715739 | Root | 6.187 |
| SRR9715742 | Root | 33.959 |
| SRR9715743 | Root | 28.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.557 |
| SRR8749028 | MeJA induced 9h | 12.887 |
| SRR8749029 | MeJA induced 9h | 19.523 |
| SRR8749030 | Uninduced | 1.526 |
| SRR8749031 | Uninduced | 0.717 |
| SRR8749032 | Uninduced | 8.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.143 |
| SRR8400027 | Control - Root | 24.614 |