Gene detail

Gene detail information of Glyur000355s00013942.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67580.2	0	Protein kinase superfamily protein
NR	XP_004504468.1	0	PREDICTED: cyclin-dependent kinase G-2-like isoform X1 [Cicer arietinum]
COG	YP_003846973.1	1.00E-23	serine/threonine protein kinase [Gallionella capsiferriformans ES-2]
Swissprot	tr\|Q7XUF4\|CDKG2_ORYSJ	0	Cyclin-dependent kinase G-2
trEMBL	tr\|A0A072TT08\|A0A072TT08_MEDTR	0	Cyclin-dependent kinase {ECO:0000313\|EMBL:KEH20557.1}

Sequence

Transcript Sequence

>Glyur000355s00013942.2
GTTTGTTGGAAAAGTCGGAGTTCCCCGTTATTTTTCTCCCCTTATTATCGGTCACACGCCTTTTCCTTGCTTCTTTTCGCTGTTTTCTTTCTCGTGGAAGGGTCTTTCTCTCTCTCTCTCTCTCTCTCTCACCTTCGCTGTCGCATCGCATCGCTTATTCGATTGCGCTTGCATTTCTCGCATTTTCCTTTTCAGTTTTCAATATCGTCATCGGTAAGCCCTATCAATCCTTCTTGTGTTCTTCGCCTACCCTCTCTCTCTATCTTCCCTAAATTTCTAGGGTTTCGATTCCAATTCCCTCTTCATCTTCCTATTTTAGCTTATCGTCATCTAATCTCTATTTGGATTCGTTCTCTCGAATCCATTTGTCATCGAATCTCACTTGTGCTCTTCAATTTTGAAATTCGTGGTATTCTCTGTGTTTTGGGTTTAGGGTTCTGTGAAACAAAAAACAAAAACAAAAAAGCTACGGTTGTTGTGAAGGAGGGATTAGGGTTTTCCCTTGGATTTTATCATTTTAGGTAGATAGATTATATGGCGGCTGGGAGACATGGTGGTTACCGCGAAAACGAGTTTAGAAATGGTGGCCGTGATGTTGTGAGGAGTGGAAGCAGGGATTCGAGAGATAGGATTAGGGTGAGGCAGAAGGATATCAGGGAGAGAGAAGTAGTCAATAATGGCAGTTACCGGTCCTCTTCGAGCCGGAGTGACTCCGGCAGCAGTGGTGGCCTTGGCCCCCGCCGGTGTGGTTTTTCTGTCAAGGCAATTGATAGAGAGCCCGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCCATTGAATCAGAGTCAGGGGCGAAGGACTGTGAGGCTGCCATGGTTGGAGGAAACATGACTCGGTCTCCACCACCGCCGCCGGAGAGGAAAAGGAAATTTTCGCCCATAGTGTGGGATCAGGATGACAAGGAAGTTAAGGAGTCATCCAAAGTTAGGGTTTCCACCACAGCAGTGACTGCTCTGCCTCCTCCGCCTCAGCTGCCAAAAGGGTTCGTTAAGTCACCGAATGAAGTTCAAATACGTTCTGTCAGGAAGAGAGAAACTGAGGATCTTGAGTTGCCCATAGCAGCTAAGGTTACCTCGCCCTCTCCTCCAGGCTTGCAATCCTTGTCACCAAAACAGACTTGGGGTAGTGTTCATGAAGCTGAGCAGCCAGAAGGTGAAGATTATGTTCCGACTCGTAATATATCATCTTCAAGATGGGCTTCTGGAGATAACTCTCCTGTTGATGAGGGTGAAATCCTCAATGATGAGGAGATGCCTAAAAGGAGGAGGAGGCTGTCTCCTGAGTTGTTGGAGACTAGAGGGAAGAGCAAGCTATTGAGCCCGGAGGAATCTAAAATAGAAGGTTTTGAAGGAGCTAGAGCCAAATCATCTGATTCTGAAGAAAGAGATACTATTCGTGGGAGAACGTCTAGTGGCGATGGTCATACTGGTGTTGAATCAGAGAAGGATGACTATATGGATGTTGATGCTCAAGCTATGAAAAGTGACACCAGTGGTAGTCACTCAGATACGGAATCTGAAGATGAAGATGATGGACGGGAGACTCCGGAACCTCCAGCTCCACCTCAAAGAACAGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCTAGAGATAAGAAGACTGGGGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAGGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTTATGGTTATGGAATACATGGAACATGATCTTAAAGGACTAATGGAGGCAATGAAGCAACCATTTAGCCAGAGTGAAGTAAAGTGCTTAATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACTTCAAATCTGCTTTTAAATAATAGAGGTGAGCTAAAAATTTGTGATTTTGGGTTGGCTCGTCAGTATGGGAGTCCTCTGAAACCATATACGCACCTGGTAGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTACTCAACAGCCATTGATATGTGGTCTCTTGGTTGTATAATGGCTGAACTATTGTCTAAGGAACCATTGTTTAATGGGAAAACGGAATTTGATCAACTTGACAAGATTTTCAGGATTCTTGGCACACCAAATGAAACAATTTGGCCCGGGTTCTCAAAATTACCTGGGGTCAAGGTCAATTTTGTCAAGCACCAGTATAATCTCCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCGGTTCTTTCTGATTNTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAGCGGATCACGGCTGAAGCTGCTCTCAATCATGAATGGTTCCATGAAGTTCCTCTTCCCAAGAGCAAAGAATTCATGCCTACTTTTCCTGCTCAACATGCTCAGGACAGGCGGATGCGGAGAGTGTACAAGAGTCCAGATCCTTTAGAGGAGCAGCGGCGGAAGGAGTTGCAGCAGGGTGAATTGGGGACTGGTGGAATTTTTGGTTAGGATTGGTGCTATTTAAACCTATGTCTCAATAATCATTCTAACATGCCATGCCGAATGTCTGCATTGATGAGGAACTTATTGGTATGAGCTGAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00355	103343	109937	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000355s00013942.2	PF00069.20	Pkinase	375	665	1.80E-75

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.706
SRR1783600	control	12.459
SRR1783602	moderate drought stress	16.558
SRR1811619	moderate drought stress	16.407

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.138
DRR006520	Root Summer glycyrrhizin high producing strain	20.196
DRR006521	Root Winter glycyrrhizin high producing strain	26.250
DRR006522	Root Winter glycyrrhizin high producing strain	25.183
DRR006523	Root Summer glycyrrhizin low producing strain	24.013
DRR006524	Root Summer glycyrrhizin low producing strain	24.249
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.985
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.720

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	37.655
SRR2868004	Drought Stress (root)	43.612
SRR2967015	Control (root)	47.580

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	31.714
SRR9715740	Leaf	31.412
SRR9715741	Leaf	45.797
SRR9715739	Root	10.258
SRR9715742	Root	32.989
SRR9715743	Root	29.470

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	25.759
SRR8749028	MeJA induced 9h	30.584
SRR8749029	MeJA induced 9h	23.016
SRR8749030	Uninduced	16.677
SRR8749031	Uninduced	27.981
SRR8749032	Uninduced	24.573

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	38.615
SRR8400027	Control - Root	35.978