Gene detail information of Glyur000355s00013924 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67420.2 | 0 | Zn-dependent exopeptidases superfamily protein |
| NR | KHN34812.1 | 0 | Endoplasmic reticulum metallopeptidase 1 [Glycine soja] |
| COG | YP_632767.1 | 8.00E-39 | M28 family peptidase [Myxococcus xanthus DK 1622] |
| trEMBL | tr|I1K3L0|I1K3L0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G27910.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00355 | 3295 | 12343 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000355s00013924.1 | PF04389.12 | Peptidase_M28 | 156 | 319 | 7.10E-28 |
| Glyur000355s00013924.2 | PF04389.12 | Peptidase_M28 | 125 | 288 | 6.70E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.241 |
| SRR1783600 | control | 5.197 |
| SRR1783602 | moderate drought stress | 4.913 |
| SRR1811619 | moderate drought stress | 4.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.931 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.003 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.038 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.829 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.402 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.725 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.866 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.989 |
| SRR2868004 | Drought Stress (root) | 13.232 |
| SRR2967015 | Control (root) | 12.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.661 |
| SRR9715740 | Leaf | 3.891 |
| SRR9715741 | Leaf | 7.153 |
| SRR9715739 | Root | 1.842 |
| SRR9715742 | Root | 5.183 |
| SRR9715743 | Root | 4.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.486 |
| SRR8749028 | MeJA induced 9h | 12.500 |
| SRR8749029 | MeJA induced 9h | 11.770 |
| SRR8749030 | Uninduced | 18.676 |
| SRR8749031 | Uninduced | 17.385 |
| SRR8749032 | Uninduced | 10.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.634 |
| SRR8400027 | Control - Root | 9.406 |