Gene detail information of Glyur000354s00015211 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64640.1 | 2.00E-38 | early nodulin-like protein 8 |
| NR | XP_004495503.1 | 3.58E-89 | PREDICTED: early nodulin-like protein 3-like [Cicer arietinum] |
| Swissprot | tr|Q9SK27|ENL1_ARATH | 1.00E-17 | Early nodulin-like protein 1 (Precursor) |
| trEMBL | tr|K7N4X8|K7N4X8_SOYBN | 2.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G35960.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00354 | 174765 | 175598 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000354s00015211.1 | PF02298.12 | Cu_bind_like | 48 | 131 | 2.60E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.422 |
| SRR1783600 | control | 3.438 |
| SRR1783602 | moderate drought stress | 0.880 |
| SRR1811619 | moderate drought stress | 0.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.179 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.315 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.516 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.623 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.209 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.498 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.883 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 88.421 |
| SRR2868004 | Drought Stress (root) | 30.511 |
| SRR2967015 | Control (root) | 28.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.002 |
| SRR9715740 | Leaf | 2.487 |
| SRR9715741 | Leaf | 1.779 |
| SRR9715739 | Root | 0.168 |
| SRR9715742 | Root | 0.084 |
| SRR9715743 | Root | 0.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.533 |
| SRR8749028 | MeJA induced 9h | 4.010 |
| SRR8749029 | MeJA induced 9h | 3.575 |
| SRR8749030 | Uninduced | 6.469 |
| SRR8749031 | Uninduced | 3.224 |
| SRR8749032 | Uninduced | 5.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.927 |
| SRR8400027 | Control - Root | 3.496 |