Gene detail information of Glyur000354s00015193 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03420.1 | 2.00E-66 | Protein of unknown function (DUF789) |
| NR | XP_004495482.1 | 2.11E-143 | PREDICTED: uncharacterized protein LOC101512294 isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072VNB3|A0A072VNB3_MEDTR | 1.00E-129 | Plant/F9H3-4 protein {ECO:0000313|EMBL:KEH42873.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00354 | 79933 | 82796 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000354s00015193.1 | PF05623.7 | DUF789 | 65 | 358 | 1.20E-82 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.623 |
| SRR1783600 | control | 9.775 |
| SRR1783602 | moderate drought stress | 19.891 |
| SRR1811619 | moderate drought stress | 20.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.089 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.812 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.633 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.433 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.585 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.272 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.809 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.492 |
| SRR2868004 | Drought Stress (root) | 41.283 |
| SRR2967015 | Control (root) | 89.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.147 |
| SRR9715740 | Leaf | 8.595 |
| SRR9715741 | Leaf | 8.121 |
| SRR9715739 | Root | 14.464 |
| SRR9715742 | Root | 14.212 |
| SRR9715743 | Root | 13.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.245 |
| SRR8749028 | MeJA induced 9h | 7.836 |
| SRR8749029 | MeJA induced 9h | 14.800 |
| SRR8749030 | Uninduced | 2.358 |
| SRR8749031 | Uninduced | 0.705 |
| SRR8749032 | Uninduced | 3.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.187 |
| SRR8400027 | Control - Root | 19.602 |