Gene detail information of Glyur000353s00015529 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64620.1 | 3.00E-43 | cell wall / vacuolar inhibitor of fructosidase 2 |
| NR | XP_003526858.1 | 2.66E-90 | PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Glycine max] |
| Swissprot | tr|O49603|CVIF2_ARATH | 1.00E-60 | Cell wall / vacuolar inhibitor of fructosidase 2 (Precursor) |
| trEMBL | tr|C6SZH9|C6SZH9_SOYBN | 9.00E-90 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G39200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00353 | 25885 | 26427 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000353s00015529.1 | PF04043.10 | PMEI | 26 | 173 | 7.70E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 254.873 |
| SRR1783600 | control | 258.451 |
| SRR1783602 | moderate drought stress | 83.662 |
| SRR1811619 | moderate drought stress | 83.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 107.492 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 103.295 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 48.413 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.524 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.572 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 47.167 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.478 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 68.374 |
| SRR2868004 | Drought Stress (root) | 30.169 |
| SRR2967015 | Control (root) | 74.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.246 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 107.647 |
| SRR9715742 | Root | 91.467 |
| SRR9715743 | Root | 98.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.355 |
| SRR8749028 | MeJA induced 9h | 58.396 |
| SRR8749029 | MeJA induced 9h | 28.844 |
| SRR8749030 | Uninduced | 10.770 |
| SRR8749031 | Uninduced | 2.109 |
| SRR8749032 | Uninduced | 3.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 230.254 |
| SRR8400027 | Control - Root | 222.932 |