Gene detail

Gene detail information of Glyur000352s00022303

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36870.2	1.00E-104	BEL1-like homeodomain 2
NR	AET04003.2	0	BEL1-related homeotic protein [Medicago truncatula]
Swissprot	tr\|Q9SW80\|BLH2_ARATH	2.00E-147	BEL1-like homeodomain protein 2
trEMBL	tr\|G7LFL6\|G7LFL6_MEDTR	0	BEL1-related homeotic protein {ECO:0000313\|EMBL:AET04003.2}

Sequence

Transcript Sequence

>Glyur000352s00022303.1
ATGGGAATAGCAACACCGCGGTACTCACTTCCTTCNTCACATTCAAAGACACACCGCCTTCAATTTCATTATAATTCTTCCAATTCTATGTCCCAAGATTACCACCAGCAGCAGCAGCAGCAGCAGGGAATCTTCTCCTTCTCGAATAACGGGGGATTCGAGAGATCCACCACCACGCAGCAGCAGCAGCAACAGCAACAGCAACAGATTCGAAGGGACAAAGTGAGGGTGCAAGGCTTCGACCCACCCCCACCGCCGCCACTAATAGGCATAGAAGAGGAAGTACCGGCAGTGTATGAAACCACCGGGATGTTATCGGAGATGTTCAATTTCCCTCCGGGCGCCACAGCCACGGCAGCTGAATTGATAGAGCAACAGCAGCAGCAAGCAATGACGACGACGTTTCAATCCTCCACCACGCGGCCACCACAGGGTGTAGTAGTGGCGAGTTCCAGCGAGTGGTACGGAAACAGACAAGGGAATCATCATCAGAGTAGCAGTGTGAATAATAATAATAATAATAATAATAGCCGTGACAGTAGCAGCAGCATACTTGATCATCATCATCATCATCATCATCAGATGTCAAACATTAATGCCGACTCAGCAGCTGCCATGCAGCTTTTTCTCATGAACCCGCAAACCACCAGATCCCCTTCCCCTCCTCCTTCTACTCTCCACATGTTGCTCCCAAACATTCCTTCCACTGCCTCCCCCTTGCAAGGCTTAGGAGGAGGGTCTTTTGGTCAATTCACTTGGAGTGCTCAAGAAGCTGCAGGAGCCACCACGAGCCACCACCAACTGAACAACAACAACCACCCGGCGCAGCCTGAGATTGCAAGTACTGTTAATGTTGAAGGGCAAGGTCTTTCGTTGTCCCTCTCCTCTTCCTTGCAACACCACCACTCGGAGGAATTGAGGATGGGAGACGGTGGTTTTCTATATTACGATAATCAAGGAGGAGGAAGTAGTGGTGGTGGACCTTATAAGAATAATAATAATCTCGGGGTTCATCACCATATACAACAAGGGGGAATCATAGGACACAACCACCACCACCAGGGAGTACATGTTGGGTTAATTGGGGCTGCAGCTCCATCATCGTCGTCCTCATCGTTAGGCGTTGTGAATGTGCTGAGGAACTCGAAGTATGTGAAGGCTGCTCAGGAATTGCTGGAAGAGTTCTGCAGTGTTGGGAGGGGTCAATTCAAGAAGANCAAGTTCAGTAGGCAGCTCTCAAACCCTAATTCCAATCCTCCCGGTGGTGCTGGTGCTTCTTCGTCTTCATCAAAAGAGGTTCCTCCTTTGTCACCGGCTGATAGGATTGAGCATCAGAGAAGGAAGGTGGACAGGAGATACAGCCACTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTNGACCTGGTGATGGGNTTTGGGGCTGCGGTTCCGTACACGGCGCTGGCTCAGAAGGCAATGTCTCGCCATTTCCGGTGCCTGAAGGATGCGATAACGGCGCAGCTGAGGCACAGTTGTGAGTTGCTGGGAGAGAAAGATGGGGTGGGGACAACAGGCTTGACCAAAGGAGAGACCCCAAGGCTGAAGCTTCTTGAACAAAGNTTAAGACAGCAGAGAGCGTTCCACCAGATGGGGATNATGGAACAGGAAGCTTGGCGACCCCAGAGAGGTTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTTCATCCGTACCCAAGCGATGCTGATAAGCATCTGTTGGCACGACAGACTGGTCTATCCAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGTTTGTGGAAACCCATGGTGGAAGATATGTACCAACAAGAACTTAAAGAAGCAGAACAGGGATCATCATCAGCAGCAGCAGCAGCAGCAGATCAATTAGATAATAGAGAAAAGAACCAACNAAGCAGCAGCAGCAACGACAGTGATCAGCACCTAGCAGCAGCACAAACTCCAACCACAGCATCAACGCCACCACCACCACTACCAACAACAGGCAAAAGATCCGATATCAATGCCACCGAAAGCGACCCATCACTTGCAGCAGCAATTAATAGACAAGGGTTCTCCGAAAACCAAGCAACCACCACTATGGCCACCGCCTCTGAGGTGGCGCCACCCGTCTCCGACTCAGACCAGCCGCCCCCACCACACAACAACAGATCATCAATATTGGCCACCGATGATGATGACACGTGTCGCCACGGCAGCTTCGTTACAGCGGAATATGGGACCGCTAATTCTGCTGCTGCTGCCACCGCCTCTGACATCGGCTCCACACTCATCAGATTTGGGACCACCGCCGGTGACGTGTCACTCACCTTAGGGCTACGTCACGCCGGAAACATGCCCGAGAAAACCACTCCTTTCTCTCTTAGGGACTTCGGAGGCATTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00352	128752	135571	-

Gene family

Gene family	subfamily
Transcription Factors Family	HB
EAR motif-containing Proteins	HB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000352s00022303.1	PF07526.6	POX	378	499	1.40E-40
Glyur000352s00022303.1	PF05920.6	Homeobox_KN	569	608	1.00E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.485
SRR1783600	control	6.815
SRR1783602	moderate drought stress	6.869
SRR1811619	moderate drought stress	6.631

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.380
DRR006520	Root Summer glycyrrhizin high producing strain	0.220
DRR006521	Root Winter glycyrrhizin high producing strain	0.911
DRR006522	Root Winter glycyrrhizin high producing strain	0.891
DRR006523	Root Summer glycyrrhizin low producing strain	0.739
DRR006524	Root Summer glycyrrhizin low producing strain	0.767
DRR006525	Leaf Summer glycyrrhizin high producing strain	19.952
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.295

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.851
SRR2868004	Drought Stress (root)	17.548
SRR2967015	Control (root)	12.429

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	21.299
SRR9715740	Leaf	15.219
SRR9715741	Leaf	15.294
SRR9715739	Root	7.565
SRR9715742	Root	10.432
SRR9715743	Root	8.628

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.029
SRR8749028	MeJA induced 9h	0.024
SRR8749029	MeJA induced 9h	0.069
SRR8749030	Uninduced	0.044
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.011

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.342
SRR8400027	Control - Root	24.642