Gene detail information of Glyur000352s00022302 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G50780.1 | 1.00E-161 | |
| NR | KEH20448.1 | 0 | BTB/POZ domain plant protein [Medicago truncatula] |
| Swissprot | tr|Q9SVM0|Y3078_ARATH | 0 | BTB/POZ domain-containing protein At3g50780 |
| trEMBL | tr|A0A072TUF3|A0A072TUF3_MEDTR | 0 | BTB/POZ domain plant protein {ECO:0000313|EMBL:KEH20448.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00352 | 115352 | 120079 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.740 |
| SRR1783600 | control | 9.801 |
| SRR1783602 | moderate drought stress | 11.467 |
| SRR1811619 | moderate drought stress | 11.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.628 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.579 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.268 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.189 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.817 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.615 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.037 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.342 |
| SRR2868004 | Drought Stress (root) | 22.890 |
| SRR2967015 | Control (root) | 30.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.304 |
| SRR9715740 | Leaf | 4.078 |
| SRR9715741 | Leaf | 6.724 |
| SRR9715739 | Root | 5.432 |
| SRR9715742 | Root | 16.874 |
| SRR9715743 | Root | 15.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.672 |
| SRR8749028 | MeJA induced 9h | 3.323 |
| SRR8749029 | MeJA induced 9h | 3.452 |
| SRR8749030 | Uninduced | 1.647 |
| SRR8749031 | Uninduced | 3.597 |
| SRR8749032 | Uninduced | 2.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.238 |
| SRR8400027 | Control - Root | 22.472 |