Gene detail information of Glyur000351s00019066 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57123.1 | 6.00E-23 | |
| NR | XP_003546438.2 | 1.10E-39 | PREDICTED: uncharacterized protein LOC100817592 [Glycine max] |
| trEMBL | tr|I1L1F0|I1L1F0_SOYBN | 3.00E-40 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00351 | 144338 | 144682 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.941 |
| SRR1783600 | control | 3.292 |
| SRR1783602 | moderate drought stress | 16.221 |
| SRR1811619 | moderate drought stress | 14.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.811 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.404 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 72.320 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 74.800 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.992 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.430 |
| SRR2868004 | Drought Stress (root) | 32.027 |
| SRR2967015 | Control (root) | 23.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.449 |
| SRR9715740 | Leaf | 0.400 |
| SRR9715741 | Leaf | 0.613 |
| SRR9715739 | Root | 12.472 |
| SRR9715742 | Root | 42.581 |
| SRR9715743 | Root | 36.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.033 |
| SRR8749028 | MeJA induced 9h | 24.423 |
| SRR8749029 | MeJA induced 9h | 5.886 |
| SRR8749030 | Uninduced | 108.131 |
| SRR8749031 | Uninduced | 396.746 |
| SRR8749032 | Uninduced | 187.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.695 |
| SRR8400027 | Control - Root | 22.823 |