Gene detail information of Glyur000351s00019061


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G57110.20autoinhibited Ca2+ -ATPase, isoform 8
NRXP_003533744.10PREDICTED: calcium-transporting ATPase 8, plasma membrane-type-like isoform X1 [Glycine max]
COGYP_501831.12.00E-90calcium-translocating P-type ATPase, PMCA-type [Methanospirillum hungatei JF-1]
Swissprottr|Q9LF79|ACA8_ARATH0Calcium-transporting ATPase 8, plasma membrane-type
trEMBLtr|K7LC34|K7LC34_SOYBN0Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold003516980699455-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0070588  calcium ion transmembrane transport


cellular_component

GO:0016020  membrane

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0005388  calcium-transporting ATPase activity

GO:0005524  ATP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000351s00019061.1PF00702.21Hydrolase331755.00E-24
Glyur000351s00019061.1PF00689.16Cation_ATPase_C2464238.20E-45
Glyur000351s00019061.2PF12515.3CaATP_NAI36811.30E-19
Glyur000351s00019061.2PF00690.21Cation_ATPase_N1472144.00E-11
Glyur000351s00019061.2PF00122.15E1-E2_ATPase2304731.30E-55
Glyur000351s00019061.2PF00702.21Hydrolase4788021.10E-31
Glyur000351s00019061.2PF00689.16Cation_ATPase_C87310493.90E-44
Glyur000351s00019061.3PF12515.3CaATP_NAI36816.80E-20
Glyur000351s00019061.3PF00690.21Cation_ATPase_N1472142.00E-11
Glyur000351s00019061.3PF00122.15E1-E2_ATPase2304722.10E-57
Glyur000351s00019061.3PF13246.1Hydrolase_like25386137.70E-14
Glyur000351s00019061.4PF00702.21Hydrolase331755.00E-24
Glyur000351s00019061.4PF00689.16Cation_ATPase_C2464238.20E-45
Glyur000351s00019061.5PF12515.3CaATP_NAI36816.80E-20
Glyur000351s00019061.5PF00690.21Cation_ATPase_N1472142.00E-11
Glyur000351s00019061.5PF00122.15E1-E2_ATPase2304722.10E-57
Glyur000351s00019061.5PF13246.1Hydrolase_like25386137.70E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.541
SRR1783600control20.676
SRR1783602moderate drought stress24.161
SRR1811619moderate drought stress23.923

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.161
DRR006520Root Summer glycyrrhizin high producing strain36.784
DRR006521Root Winter glycyrrhizin high producing strain296.804
DRR006522Root Winter glycyrrhizin high producing strain289.216
DRR006523Root Summer glycyrrhizin low producing strain60.866
DRR006524Root Summer glycyrrhizin low producing strain61.041
DRR006525Leaf Summer glycyrrhizin high producing strain15.835
DRR006526Leaf Summer glycyrrhizin high producing strain15.841

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)47.628
SRR2868004Drought Stress (root)43.421
SRR2967015Control (root)52.209

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf18.251
SRR9715740Leaf24.555
SRR9715741Leaf20.214
SRR9715739Root10.282
SRR9715742Root42.590
SRR9715743Root36.175

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h42.166
SRR8749028MeJA induced 9h59.578
SRR8749029MeJA induced 9h31.242
SRR8749030Uninduced13.943
SRR8749031Uninduced13.740
SRR8749032Uninduced14.834

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root42.416
SRR8400027Control - Root53.021

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved