Gene detail information of Glyur000351s00019053 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29870.1 | 3.00E-43 | Oligosaccharyltransferase complex/magnesium transporter family protein |
| NR | XP_003533748.1 | 1.27E-93 | PREDICTED: putative oligosaccharyltransferase complex subunit CG9662-like [Glycine max] |
| trEMBL | tr|I1L1F7|I1L1F7_SOYBN | 5.00E-94 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00351 | 24985 | 25443 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000351s00019053.1 | PF04756.8 | OST3_OST6 | 10 | 142 | 2.30E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 444.929 |
| SRR1783600 | control | 440.639 |
| SRR1783602 | moderate drought stress | 239.814 |
| SRR1811619 | moderate drought stress | 238.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 247.924 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 246.158 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 132.849 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 129.720 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 208.996 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 211.191 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 95.800 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 99.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 163.773 |
| SRR2868004 | Drought Stress (root) | 109.432 |
| SRR2967015 | Control (root) | 112.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 112.967 |
| SRR9715740 | Leaf | 92.726 |
| SRR9715741 | Leaf | 137.816 |
| SRR9715739 | Root | 227.719 |
| SRR9715742 | Root | 158.751 |
| SRR9715743 | Root | 165.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 240.714 |
| SRR8749028 | MeJA induced 9h | 145.574 |
| SRR8749029 | MeJA induced 9h | 137.474 |
| SRR8749030 | Uninduced | 65.195 |
| SRR8749031 | Uninduced | 38.392 |
| SRR8749032 | Uninduced | 58.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 130.980 |
| SRR8400027 | Control - Root | 125.243 |