Gene detail information of Glyur000351s00019052 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57100.1 | 3.00E-126 | Nucleotide/sugar transporter family protein |
| NR | XP_003546448.1 | 0 | PREDICTED: uncharacterized membrane protein At1g06890 isoformX1 [Glycine max] |
| Swissprot | tr|Q8RXL8|Y1689_ARATH | 5.00E-26 | Uncharacterized membrane protein At1g06890 |
| trEMBL | tr|I1MH55|I1MH55_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G18230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00351 | 14431 | 19113 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.378 |
| SRR1783600 | control | 15.310 |
| SRR1783602 | moderate drought stress | 7.302 |
| SRR1811619 | moderate drought stress | 7.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.319 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.923 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.765 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.548 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.670 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.274 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.279 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.852 |
| SRR2868004 | Drought Stress (root) | 7.781 |
| SRR2967015 | Control (root) | 8.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.302 |
| SRR9715740 | Leaf | 1.186 |
| SRR9715741 | Leaf | 2.199 |
| SRR9715739 | Root | 11.681 |
| SRR9715742 | Root | 15.800 |
| SRR9715743 | Root | 14.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.964 |
| SRR8749028 | MeJA induced 9h | 4.995 |
| SRR8749029 | MeJA induced 9h | 2.992 |
| SRR8749030 | Uninduced | 1.369 |
| SRR8749031 | Uninduced | 0.277 |
| SRR8749032 | Uninduced | 0.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.763 |
| SRR8400027 | Control - Root | 32.327 |