Gene detail information of Glyur000350s00020072 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15260.1 | 8.00E-10 | |
| NR | XP_007152831.1 | 5.34E-66 | hypothetical protein PHAVU_004G163500g [Phaseolus vulgaris] |
| trEMBL | tr|V7C6A6|V7C6A6_PHAVU | 2.00E-66 | Uncharacterized protein {ECO:0000313|EMBL:ESW24825.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00350 | 122340 | 123035 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.691 |
| SRR1783600 | control | 2.788 |
| SRR1783602 | moderate drought stress | 2.081 |
| SRR1811619 | moderate drought stress | 2.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.796 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.471 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.431 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.210 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.680 |
| SRR2868004 | Drought Stress (root) | 3.434 |
| SRR2967015 | Control (root) | 4.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.539 |
| SRR9715740 | Leaf | 0.290 |
| SRR9715741 | Leaf | 1.186 |
| SRR9715739 | Root | 0.551 |
| SRR9715742 | Root | 2.159 |
| SRR9715743 | Root | 1.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.817 |
| SRR8749028 | MeJA induced 9h | 6.497 |
| SRR8749029 | MeJA induced 9h | 1.779 |
| SRR8749030 | Uninduced | 23.884 |
| SRR8749031 | Uninduced | 3.297 |
| SRR8749032 | Uninduced | 3.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.542 |
| SRR8400027 | Control - Root | 6.707 |