Gene detail information of Glyur000350s00020056 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56500.1 | 2.00E-05 | serine-rich protein-related |
| NR | XP_003528940.1 | 3.78E-24 | PREDICTED: uncharacterized protein LOC100798389 [Glycine max] |
| trEMBL | tr|I1KIR7|I1KIR7_SOYBN | 1.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G09570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00350 | 26382 | 26651 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 332.503 |
| SRR1783600 | control | 333.046 |
| SRR1783602 | moderate drought stress | 398.324 |
| SRR1811619 | moderate drought stress | 382.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 329.566 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 325.207 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 243.081 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 240.348 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 278.150 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 269.396 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 400.124 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 401.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.633 |
| SRR2868004 | Drought Stress (root) | 76.526 |
| SRR2967015 | Control (root) | 64.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.122 |
| SRR9715740 | Leaf | 53.321 |
| SRR9715741 | Leaf | 32.381 |
| SRR9715739 | Root | 66.148 |
| SRR9715742 | Root | 33.615 |
| SRR9715743 | Root | 40.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 82.144 |
| SRR8749028 | MeJA induced 9h | 115.669 |
| SRR8749029 | MeJA induced 9h | 150.459 |
| SRR8749030 | Uninduced | 43.298 |
| SRR8749031 | Uninduced | 79.497 |
| SRR8749032 | Uninduced | 121.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 78.536 |
| SRR8400027 | Control - Root | 61.509 |