Gene detail information of Glyur000350s00020054 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52342.1 | 2.00E-04 | |
| NR | XP_003629642.1 | 3.40E-17 | hypothetical protein MTR_8g083460 [Medicago truncatula] |
| trEMBL | tr|G7LH59|G7LH59_MEDTR | 1.00E-17 | Uncharacterized protein {ECO:0000313|EMBL:AET04118.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00350 | 17386 | 17619 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.304 |
| SRR1783600 | control | 0.455 |
| SRR1783602 | moderate drought stress | 0.935 |
| SRR1811619 | moderate drought stress | 0.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.305 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.556 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.731 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.465 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.937 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.222 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.429 |
| SRR2868004 | Drought Stress (root) | 5.759 |
| SRR2967015 | Control (root) | 6.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.959 |
| SRR9715740 | Leaf | 16.390 |
| SRR9715741 | Leaf | 14.265 |
| SRR9715739 | Root | 0.483 |
| SRR9715742 | Root | 4.705 |
| SRR9715743 | Root | 1.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.246 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.766 |
| SRR8400027 | Control - Root | 6.657 |