Gene detail

Gene detail information of Glyur000349s00021115

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G31770.1	0	ATP-binding cassette 14
NR	XP_003537708.1	0	PREDICTED: ABC transporter G family member 14-like [Glycine max]
COG	YP_001517187.1	1.00E-37	ABC transporter ATP-binding protein [Acaryochloris marina MBIC11017]
Swissprot	tr\|Q9C6W5\|AB14G_ARATH	0	ABC transporter G family member 14
trEMBL	tr\|I1LIF7\|I1LIF7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G09560.1}

Sequence

Transcript Sequence

>Glyur000349s00021115.1
TGCTGCTCCTCGCTACACATTGGGGAGTCAAGTTAAAAGGAACATCTTAACTTCTCTCAACACACCCAACCCAATCATCACCACTATTTACCACCAAAAAAACACTGCAAATTAATCTCTTACTTGTGTTATTCTTCTTCAGCCATGCCACAGAACTGCAGCATAGCACCAAAACCAGAATACTGCAATAGTCTCTCCGTGGAAGGACCACCAGAGATGACTCAGCCTCATGATGACTCAAGTGTCCTTCCCTACCCCATACAAACCAATGAACAATCTTTACCAAAACTCATTATGTACCCCATCACTTTGAAGTTTGAGGATTTGGTGTACAAAGTTAAAATAGAGGAGCAGAAAGGAGTTTGTTGGGGAAGTAAATGGACTTGCAGAGAGAAGACCATACTGAATGGGATCACAGGTGTGGTGTGTCCAGGGGAGATACTAGCCATGCTGGGGCCATCAGGTAGTGGCAAAACCACACTCCTCACAGCACTCGGAGGCCGTCTCAGTGGTAAACTCTCTGGAAAGATCACATACAACAATCAACCCTTCTCAGGTTCCATAAAGAGAAGAACAGGTTTTGTGGCCCAGGATGATGTTCTATACCCTCACCTCACTGTCACTGAAACTCTAGTGTTCACTGCACTTCTGAGGCTTCCAAAAAGCTTATCTAGAGATGAGAAAGTTGAGCATGTGGAAAGAGTGATCACTGAGTTAGGACTAACTCGTTGTAGGAGTAGCATGATTGGAGGACCACTCTTGAGAGGGATATCAGGTGGTGAGAAAAGGAGGGTGAGCATAGGCCAAGAAATGCTCATCAATCCAAGCCTATTGTTGCTTGATGAGCCAACTTCAGGTTTGGATTCAACCACGGCACTGAGGATCTTAAACACTATCAAAAGACTTGCTGCTGGTGGTAGAACTGTTGTCACCACCATTCACCAACCCTCTAGTAGACTATACTACATGTTTGACAAGGTGGTGTTGCTCTCTGAAGGGTGCCCCATCTATTATGGTCCTGCTTCAACTGCTCTTGACTACTTTTCATCTGTTGGTTTCTCCACATGCATGACTGTTAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCGGACTCCAAGCATGTAACTGAACAAAGTGAGGTCCTGGAACAGGAGAGGAAGATGGTGAGAGAATCTCTCATCTCTGCTTATGAGAAGAACATAGCTCCAAGGCTGAAAGCTGAGGTTTGCAGCCTGGAGGTGAACAACTACAACAACAACACAACAAAAGATGCTTGCACAAGGAATCACATAAAACCAGAGCAATGGAGCAATAGCTGGTGGCATCAATTCACAGTATTATTACAAAGGGGAGTGAGGGAGCGAAGGCATGAAGCCTTCAACAGGCTGAGAATCTTCCAAGTCATAAGTGTGGCTTTCCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACATTCAGGATCGGGTGGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTTTACCCTCTCTACAATGCAGTCTTCACATTTCCTCAAGAGAGGAGAATGCTGATTAAGGAACGGTCGTCGGGAATGTACCGCCTTTCTTCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCTCTGGAGCTTGCACTTCCAACAGCATTTGTCTTCATAATCTATTGGATGGGAGGCCTCAAACCTGATCCTGCGACTTTCATCCTTTCTCTCCTTGTGGTCCTTTACAGTGTTGTTGTCTCTCAAAGTCTAGGCCTAGCACTTGGTGCTATCTTGATGGAGATTAAACAGGCCACTACACTGGCTTCTGTGACAACCCTTGTGTTTCTAATTGCTGGAGGGTACTATATACAACAGATTCCACCTTTCATAGTGTGGCTCAAGTACCTCAGCTATAGCTACTATTGTTACAGGCTTCTTCTAGGTGTCCAATACAATGAAAATGATTATTATGAATGCTCAAAGGGGCAGTTCTGCAAGGTTATAGAATTCCCTCCAATCAAATCAATGGGATTGAACCGTATGTGGGTTGATGTGTGCATCATGGCCCTCATGTTGGTTGGTTATAGACTAGTTGCTTATTTTGCACTGCATAGAGTTAGGTAGATAAATCTAAANTCTCACTGAGCTCCCCATACAGAATAGCATGAGAACTTGAAGAAGAGTTTTTGTACTAATTGAAATCGAGGAATAATACTAGAATATTAGACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00349	179782	182875	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016020 membrane

molecular_function

GO:0005524 ATP binding

GO:0016887 ATPase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000349s00021115.1	PF00005.22	ABC_tran	88	237	1.90E-24
Glyur000349s00021115.1	PF01061.19	ABC2_membrane	399	604	1.00E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.521
SRR1783600	control	4.365
SRR1783602	moderate drought stress	5.808
SRR1811619	moderate drought stress	5.751

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.700
DRR006520	Root Summer glycyrrhizin high producing strain	11.581
DRR006521	Root Winter glycyrrhizin high producing strain	0.047
DRR006522	Root Winter glycyrrhizin high producing strain	0.097
DRR006523	Root Summer glycyrrhizin low producing strain	4.296
DRR006524	Root Summer glycyrrhizin low producing strain	4.440
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.309
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.359

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	37.258
SRR2868004	Drought Stress (root)	70.171
SRR2967015	Control (root)	42.615

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.919
SRR9715740	Leaf	4.212
SRR9715741	Leaf	4.197
SRR9715739	Root	4.205
SRR9715742	Root	13.212
SRR9715743	Root	10.097

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.038

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.875
SRR8400027	Control - Root	6.975